Gene PP_4115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4115 
Symbol 
ID1041900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4652226 
End bp4653029 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content60% 
IMG OID637147516 
ProductNolW domain protein 
Protein accessionNP_746234 
Protein GI26990809 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1450] Type II secretory pathway, component PulD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCAGA TCCGGCAAAA AGTCAGCAAA TTTGCCATCA TGTTGATTCC ACCTGCGGAG 
ATCATGGACA TGCCGCTACG CCCCCTTTTC ACCTCCCTGT TGCTGGTCGC CAGCCTCACC
GCCCATGCCG CCACCGAGGT GGTGCCACTT CAGCATCGCA GCAGCGCCGA ACTGCTGCCC
GCCCTGCAGG CCTTCATCGG CAAGGACGGC ACGGTCAGCG CCTTCGAGAA CAAACTGATC
GTCAACGCCA GCCCCGAGCG CATCGACGAC CTGCGCGCCC TGCTGCAACA GCTGGACACC
GCGCCCAAGC GCCTGCTGAT CAGCGTCGAC AACAACGACA GCAACTTCCA GGACAACCGC
GGCAACGCAC GCGTCATTCA CTACGGCACC AGCAACCGCG ACGGCGGCAT GCAACAGGTA
CAAGCCAGCG AAGGGCAACC GGCACTGATC CAGGTGGGCC AGAGCATCCC CATTACCAGC
ACCAGCACAG ACGGCTATGG GCGCATTCAA AGCAACACCG AATACCGCAA CGTGACCCAA
GGCTTCTACG TAACCCCGAG CCTGAGCGGC GAAACGGTTC GTCTGCAAAT AAGCAGCAAT
AATGACCGCA TCAGCCACGA ACGTGCAGAT GTAGTGAAAG TACAAAGTAC CGACACGACA
GTCACGGGTA AGCTCGGCGA GTGGATCACC CTGGCGGGGT TCAACCAGCA GAGCCAAGCC
GACCGCAGCG CGTCAAACCA CACGTACAGC ACCCAACGGG GTGAAAACAT GACATTGCGG
GTCAAAGTCG ACCTTGTCGA CTGA
 
Protein sequence
MIQIRQKVSK FAIMLIPPAE IMDMPLRPLF TSLLLVASLT AHAATEVVPL QHRSSAELLP 
ALQAFIGKDG TVSAFENKLI VNASPERIDD LRALLQQLDT APKRLLISVD NNDSNFQDNR
GNARVIHYGT SNRDGGMQQV QASEGQPALI QVGQSIPITS TSTDGYGRIQ SNTEYRNVTQ
GFYVTPSLSG ETVRLQISSN NDRISHERAD VVKVQSTDTT VTGKLGEWIT LAGFNQQSQA
DRSASNHTYS TQRGENMTLR VKVDLVD