| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4107 |
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| Symbol | |
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| ID | 1042233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4642054 |
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| End bp | 4642950 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637147509 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_746227 |
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| Protein GI | 26990802 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.41444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAC GCCTGATGCC TTCGACCACC GCCCTTCAGT GCTTCGAAGC GGCCGCTCGC
CACCTCAGCT TCACCCGCGC GGCCCAGGAA CTGCACCTGA CCCAGAGCGC CGTCAGCAAG
CAGGTCGCGC AGCTTGAGGA CATGCTCTCG CACTCGCTGT TCCAGCGCAT TCGCCGGCGC
CTGCACCTGA CCCCGGCCGG CGCGCTGTAC CTCACCGAAG TGAACAAGAT CCTCACCCAG
ATCGACATAT CCAGCCGCTA CATCCTCAGC TACGGCGACG AAACCGAAGT GCTGCGCATC
GCCACCCAGC CGACCTTCGG CGCCCGCTGG CTGGTGCCCC GGCTCAAGGG TTTTGGTGAC
CGCTACCCAC GCATTCACCT GGATGTGCGC AACGAGCTGG AGCCATTCGA CCTGGTACAG
GCCAAGGCGG ACGTCGCCTT TTTCTTCGGC CAGGGCACCT GGCCCGGGGC GACCTGCATC
GAGTTGTTCA GCGAAGAAGT GGTGCCGGTG TGCAGCCCGC AGCTGCTGGC CAGCCACCGT
TTCGACAGCG CCCAGGCGCT GACTGAGCAC CGCCTGTTGC AATGCGTGTC GCGGCCGGAG
GCCTGGCATG AATGGTTCCT GGGGCTTGGG TTGCATAGCC AGAACAGCTA CCACGGGCCG
CGCTTCGACA CGTTCTACCT GTGTATCCGC GCGGCCATCT CCGGCTGCGG CATAGCCCTG
ATTCCCCGCT ATCTGGTGGC CGAAGAGCTG AGCGAAGGCA AGCTGGTGGT GGCCTGGGAC
CACCCTGTGG CAAGCAACGG GAGGCACTTC ATCGCGCATG CCGAGCATGC GGCCGAAGTG
CCCAAGATCA GGGCCTTCGT GCAGTGGATC CGGGAGCGGG TGGCTGAAGG CGATTGA
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| Protein sequence | MSKRLMPSTT ALQCFEAAAR HLSFTRAAQE LHLTQSAVSK QVAQLEDMLS HSLFQRIRRR
LHLTPAGALY LTEVNKILTQ IDISSRYILS YGDETEVLRI ATQPTFGARW LVPRLKGFGD
RYPRIHLDVR NELEPFDLVQ AKADVAFFFG QGTWPGATCI ELFSEEVVPV CSPQLLASHR
FDSAQALTEH RLLQCVSRPE AWHEWFLGLG LHSQNSYHGP RFDTFYLCIR AAISGCGIAL
IPRYLVAEEL SEGKLVVAWD HPVASNGRHF IAHAEHAAEV PKIRAFVQWI RERVAEGD
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