Gene PP_4029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4029 
SymbolnudC 
ID1042077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4539451 
End bp4540281 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content64% 
IMG OID637147438 
ProductNADH pyrophosphatase 
Protein accessionNP_746157 
Protein GI26990732 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.459917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAC GCTGGACTAC TGCAGTACTC GACCCACAGA TGACCGGGGG GCTAGCCGTG 
GCCCGCAGCC CTGAAGGGTT TCTGGTGGAC GCCAACGGCG CGCTGTTCCC CCGCGACTGG
CTAAAGCGCC AGGACCTCGA CGTGCTGTGC GAGCATGGCA TCGGCCACTT TGACGGCCAG
CCGGTGTTCC TGCTGGAACT GCGCAGCGCC ACTGATGTGC CAGGCTGCAG CTGGCGCGGC
CTGCGTGCGT TCATGCTCGA AGGCGACTTC GACACCTACA AGGTGCTGGG CTATGCCGCA
CAGATCGGCA CCTGGGCCCG CGAGCATCGC TTCTGCGGCA GTTGCGGCCA GCCGATGACG
CAAATTCGCT GGGAGCGGGC GATGTATTGC CAACCCTGCG ACCTGCGCAG CTATCCGCGA
ATTTCACCCA GCATGATCGT GCTGGTGACC CGCGGCGATG AAATCCTGCT GGCGCGTTCG
CCGCGCTTCG TCACCGGGGT GTACAGCACC TTGGCAGGTT TTGCCGAACC GGGTGAATCG
GCCGAAGACT GCCTGGTGCG CGAAGTGCGC GAAGAAGTGG CGGTGGAGGT GAAGAACATT
CAGTACGTCG GCAGCCAGTG CTGGCCGTTT CCGCATTCGA TGATGCTCGG TTTCCATGCC
GAGTACGCCG GTGGCGAGAT TGTCATGCAA CCGGACGAGA TCGAGGACGC CAAGTGGTTC
AGCGTCCACG ACTTGCCGCC GCTGCCGGCC GGGCGGTCCA TTGCCCGTTA TCTGATCGAT
CTGTATGTTG CGCGGCGGCT GGGCTGTGAT ATCCCGGCTT TCCCGTCCTA G
 
Protein sequence
MSARWTTAVL DPQMTGGLAV ARSPEGFLVD ANGALFPRDW LKRQDLDVLC EHGIGHFDGQ 
PVFLLELRSA TDVPGCSWRG LRAFMLEGDF DTYKVLGYAA QIGTWAREHR FCGSCGQPMT
QIRWERAMYC QPCDLRSYPR ISPSMIVLVT RGDEILLARS PRFVTGVYST LAGFAEPGES
AEDCLVREVR EEVAVEVKNI QYVGSQCWPF PHSMMLGFHA EYAGGEIVMQ PDEIEDAKWF
SVHDLPPLPA GRSIARYLID LYVARRLGCD IPAFPS