| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3960 |
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| Symbol | |
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| ID | 1046603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4469218 |
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| End bp | 4469823 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637147370 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | NP_746090 |
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| Protein GI | 26990665 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.110455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.471806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTCGCC GCACCCGCGC CGCAATGCAA GAAACCCGAG CCCTGTTACT GGCCACCGCC
CGCCAGATGT TCAGCGAGCA GGGATTTGCG CACGCCTCGA TGGATGATCT GACCGCCCGG
GCGGGCTTGA CGCGGGGGGC GTTGTACCAC CACTTTGGCG ACAAGAAGGG CTTGCTGGCA
GCCGTCGTTG AGCAGCTCGA CGCTGAAATG GACGAGCGCC TGCGTGCTAT TACCGAGACC
GCCGATAACG CTTTGGACGG CTTCCGCCAA CGCTGCCACG CCTACCTGGA GATGGCGCTG
GAGCCCGAGA TCCAGCGTAT CGTATTGCGC GACGCCAGAG CGGTGTTGGG GGGCGGCTCG
CCTGAGGCCC AGCGGTATTG CATAGAGTCG CTGCGCCAGT TGATCGACAA CCTGGTACTA
GAGGGCGTTT TCGTCAACGC GCACGCTCAA GCGCTGGCTG CGTTGATCTA CGGCAGCTTG
GCTGAAGCGG CTGTGTGGAT CGCGGAGGCC GAAGACGGCA ATGCACGCTT GGCGCAGGCT
GGCAAGGCGT TCGACCTGCT GTTGCTCGGG GTGCTAAAGC GGCCAACAGA CTCTACGGAC
GCGTGA
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| Protein sequence | MVRRTRAAMQ ETRALLLATA RQMFSEQGFA HASMDDLTAR AGLTRGALYH HFGDKKGLLA
AVVEQLDAEM DERLRAITET ADNALDGFRQ RCHAYLEMAL EPEIQRIVLR DARAVLGGGS
PEAQRYCIES LRQLIDNLVL EGVFVNAHAQ ALAALIYGSL AEAAVWIAEA EDGNARLAQA
GKAFDLLLLG VLKRPTDSTD A
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