Gene PP_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3947 
Symbol 
ID1046617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4449926 
End bp4450399 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content66% 
IMG OID637147357 
Product(2Fe-2S)-binding domain protein 
Protein accessionNP_746077 
Protein GI26990652 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0468181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.360415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAA CCATCTCCCT GCAGGTCAAC GGCCAGCCCG TCGAAGTCAG CGCCATGCCT 
GACACCCCGC TGCTGCTGAT CCTGCGCAAC GACCTGTGCC TGAACGGCCC CAAGTACGGC
TGCGGCCTGG GCGAATGCGG GGCGTGTACG GTGATCATCG ACGGCGTGGC CGCCCGCTCC
TGCGTCATCC CCTTGGCCGG CGCCGCCGGC CGCAATATCA CCACCCTCGA AGGGCTGGGC
AGCAAGGCCG CACCGCACCC CGTGCAACAG GCGTTCATCG ACGAGCAGGC GGCCCAGTGT
GGTTACTGCA TGAACGGCAT GATCATGACC GCCAAGGCCC TGCTCGATCG CATTCCCGAG
CCCAGCGACG AACAGATTCG CAATGAGCTG TCCGCCAACC TGTGCCGCTG CGGCACCCAC
GTCGAAATCC TGCGCGCCGT GCGCCGCGCT GCCGAGACCC GGAGAAAGCC ATGA
 
Protein sequence
MQTTISLQVN GQPVEVSAMP DTPLLLILRN DLCLNGPKYG CGLGECGACT VIIDGVAARS 
CVIPLAGAAG RNITTLEGLG SKAAPHPVQQ AFIDEQAAQC GYCMNGMIMT AKALLDRIPE
PSDEQIRNEL SANLCRCGTH VEILRAVRRA AETRRKP