| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3932 |
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| Symbol | |
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| ID | 1046633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4437054 |
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| End bp | 4438262 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637147342 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | NP_746062 |
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| Protein GI | 26990637 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0460046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0449819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGGGG CCGACCTGCT GTGTGGCAGC GCCTGGGTAC CGGCTCTGTG GTTAAACCTG
TGCAATCTTG GCGTGGTGGT CACCCTCTGG CAGCTGCTGT CGCGCTTGCC ACGCATGCAC
CGGCGCATGC GCAGCCCGCA CGGCGTACTC AGCGTGTTCG CCGCCTGCGC CGCCGCTGCC
ATGGTGGCGG CGAGCATGGC AGCGGTAATG GCCGCACCCT GGTTCGAACA GTCGTTGCGC
GCCACCTGGC TAGCCTGGTT CAGCGAACAG TTCTCGACCG GCGTGCTGGT GCTGCCGGTG
CTGCTTACAG CGCCCTCGGT GCGGGCCTTG GTGCGCGGCG GCGCGCAGCC CATCCGCCTG
GCGCCGTTGC TGGTACTGCT GGCCTCGCTG GCATTCAGCA TCGCATTCGG TGGCCCTGGG
GCCATTGCCT TCCCGATTGC CGCGTTACTG TGGTGTGCCT GGACCTATTC ACCGTTTCTG
GTTTCATTGC TGACGCTCAC GGCCGGCAGT ACGCTGATCG TGGCTGTGGC GCAAAACCTC
ATGCACTTCA GCGTGCCGCA GAGCGAGCCT GGGGTTACCA CGCTGATGTC GGCGCGCCTG
GGCATCGCCA TGCTGGTGCT CGGGCCGCTG GTGGTGGCCT GCGTCAGCCA GGCCAACCGT
AGCCTCATGG CCCGCCTGGC GCACCAGGCC ACCGTCGACC ACCTCACCGG TGTGCTCACC
CGCAGCGCCT TCACACGCCG CGCCAACGCG CTGCTGGAGA GCCGTCAACA GCACGCCCAG
GCGCTGCCGC TGACCCTGAT GATGCTGGAC ATCGACCACT TCAAGTCGAT CAACGATGCC
CACGGCCATG CCGTCGGTGA CCAGGTGCTG CGCCAATTCG CCAGCACCCT CCAGGACCAG
CTGCACAACG ATGAGCTGAT CGCACGCCTG GGTGGCGAAG AATTCGTTGT CATCCTGCCC
GGACTTGCGC CAGAGCGGGC CAACTTCACC GCCGAACGCC TGCGCCGCGC CATACAGGAC
CTGCACGTGA CACAGGCCGA CCAGCGCCTG CAGATTACCG TGAGTATCGG TGTGGCAGGC
TGCGACGCAG ACATGCCGGC CCCCAGCCTC GACGAACTGC TGGCCAGTGC CGACCAGGCG
CTGTACCGGG CCAAGGCCCG GGGCCGCAAC CGCGTCGAAC AGGCCGAAGC ACAGCGCCTG
GTGATCTGA
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| Protein sequence | MVGADLLCGS AWVPALWLNL CNLGVVVTLW QLLSRLPRMH RRMRSPHGVL SVFAACAAAA
MVAASMAAVM AAPWFEQSLR ATWLAWFSEQ FSTGVLVLPV LLTAPSVRAL VRGGAQPIRL
APLLVLLASL AFSIAFGGPG AIAFPIAALL WCAWTYSPFL VSLLTLTAGS TLIVAVAQNL
MHFSVPQSEP GVTTLMSARL GIAMLVLGPL VVACVSQANR SLMARLAHQA TVDHLTGVLT
RSAFTRRANA LLESRQQHAQ ALPLTLMMLD IDHFKSINDA HGHAVGDQVL RQFASTLQDQ
LHNDELIARL GGEEFVVILP GLAPERANFT AERLRRAIQD LHVTQADQRL QITVSIGVAG
CDADMPAPSL DELLASADQA LYRAKARGRN RVEQAEAQRL VI
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