Gene PP_3900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3900 
SymbolhicA-2 
ID1046665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4415398 
End bp4415646 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content55% 
IMG OID637147309 
ProducthicA protein 
Protein accessionNP_746030 
Protein GI26990605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00272439 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTAAGC AAGAAAAGCT GCTCGCGAAG CTGCTGAACA AGCAAGCAGG ATTCACTTGG 
CCTGAGCTGG TCACGCTGCT GGGTGGGCTT GGATACCGCC ATATCGAGGG TGATGGCAGC
CGAGTGAAGT TCGACAATGG CCACCCGCAG GCAATGATCA ACTTGCACAA GCCGCACCCC
GGCAATGAGC TGAAGGCCTA CGTTAAACGC CAGGTAATAG AGCACCTGAA AGCAGGAGGA
TTGATCTGA
 
Protein sequence
MSKQEKLLAK LLNKQAGFTW PELVTLLGGL GYRHIEGDGS RVKFDNGHPQ AMINLHKPHP 
GNELKAYVKR QVIEHLKAGG LI