| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3899 |
|---|
| Symbol | hicB-2 |
|---|
| ID | 1046666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4415057 |
|---|
| End bp | 4415389 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637147308 |
|---|
| Product | hicB protein |
|---|
| Protein accession | NP_746029 |
|---|
| Protein GI | 26990604 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00302148 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCAGT ACCGAGGCTA CTACGGCTCC ATTGAGGCCA GCCCCGAGGA CAATTGCCTA
TTCGGCAAGC TTCAGTTCAT CCGCGCCCTT GTCAGCTATG AGGGCGAGAC GGTTGCTGAA
CTGACCCAGG CGTTCCGCGA TGCAGTGGAC GACTATCTCG ACACCTGCGC ATCACTCGGG
CAGAACCCGG AAATTCCGTG CAAGGGGTCG TTCAATGTGA GGGTAGGGCA CGACCTGCAC
CTAGCGGCCA GCGTGGCAGC CACCAAGCAA AGTATTTCCT TGAATGATCT GACACGCAAA
GCGCTTAGTG AGTACCTGGG TCATCACGCG TAG
|
|---|
| Protein sequence | MLQYRGYYGS IEASPEDNCL FGKLQFIRAL VSYEGETVAE LTQAFRDAVD DYLDTCASLG
QNPEIPCKGS FNVRVGHDLH LAASVAATKQ SISLNDLTRK ALSEYLGHHA
|
|---|
| |