Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3801 |
Symbol | |
ID | 1046766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4329654 |
End bp | 4330556 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147209 |
Product | periplasmic solute binding protein |
Protein accession | NP_745931 |
Protein GI | 26990506 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.142921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.42718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCGCT CCGCCCTCGC CCTGCTCCTG ACCTTTGCCC TGCCGGCACT GGCCCTGGCC GATAACAGCA AGCCGCTGCG AATCGGCATC ACCCTGCACC CCTATTACAG CTACGTGAGC AATATTGTCG GCGACAAGGC CGAGGTGGTT CCCCTGATTC CGGCGGGCTT CAACCCGCAC GCCTACGAGC CGCGGGCCGA GGACATCAAG CGCATCGGCA CACTGGACGT GGTGGTGCTC AACGGTGTTG GCCATGACGA TTTCGCAGAC CGCATGATCG CCACCAGCGA AAAACCCGAC ATCGCCACTA TCGAAGCCAA TCAGAACGTG CCGCTGCTGG CGGCCACCGG CATTGCCGCG CGCGGTGCCG GCAAGGTGGT CAACCCGCAC ACCTTTCTGT CGATCAGCAC CACCATCGCC CAGGTGAACA ACATCGCCCG TGAACTGGGC AAACTCGACC CGGACAACGC CAAGCTGTAC ACGCAGAACG CCCGTGCCTA CGCCAAGCGC CTGCGCGCCC TGCGTGCCGA GGCCCTGGCC AAGGTCACCG AAGCCCCTGG CGCAACGTTC CGGGTCGCTA CCATCCATGC CGCCTATGAC TACCTGGTGC GCGATTTCGG CCTGGAGGTG ACCGCTGTCG TCGAGCCGGC CCATGGCATC GAGCCCAGCC CGGCGCAGCT GAAAAAGACC ATCGACCAGC TCAAGGCGCT GGATGTGCGG GTGATCTTCT CGGAAATGGA CTTCCCGTCG GCCTATGTCG AAACCATTCA GCGTGAGTCC GGTGTGCGCC TGTATCCGTT GACGCATATC TCCTACGGCG ATTACACCAA GGACAAGTAC GAGGTGGAAA TGAAGCGCAA CCTCGACACG GTGGTCCGCG CCATTCAGGA GAACCGCGCA TGA
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Protein sequence | MFRSALALLL TFALPALALA DNSKPLRIGI TLHPYYSYVS NIVGDKAEVV PLIPAGFNPH AYEPRAEDIK RIGTLDVVVL NGVGHDDFAD RMIATSEKPD IATIEANQNV PLLAATGIAA RGAGKVVNPH TFLSISTTIA QVNNIARELG KLDPDNAKLY TQNARAYAKR LRALRAEALA KVTEAPGATF RVATIHAAYD YLVRDFGLEV TAVVEPAHGI EPSPAQLKKT IDQLKALDVR VIFSEMDFPS AYVETIQRES GVRLYPLTHI SYGDYTKDKY EVEMKRNLDT VVRAIQENRA
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