Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3774 |
Symbol | |
ID | 1046387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4300834 |
End bp | 4301508 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637147182 |
Product | alginate lyase 2 |
Protein accession | NP_745904 |
Protein GI | 26990479 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000761294 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGTAG ATATCAGCCA CCTCACCATC GCCACGCCGG TAGCCGTCTC CTCAACCAAC CCTGTTGCTC TGGAGCTGAA CGGTGCTGAA GCGATTGCCC GCTTTCCCAG CATCGTGACG GTGCTCAGCG ATGGCTCGAT CCAGTTCTCA GCCCCAACCA AAGGGGCTTC GAGCAAAAGC ACCCACAGGA CACGCTGCGA ATGGACGGAA ACGCAAGACT GGACGCTGGC CAGCGCCCAG GATCACTGGA ATCGCCAGAC AATGACGCTG ACCAAGGTCA ACTCGGCGCA GAAGGTGGTC ATCGCCCAGA TGCACGTACG CGGGGACGAC GGCCCGCCGG TAAAGGTGTT CTGGAACAAG GGCAACATCA CCCTGGGGTT TCGGCGCACC TTCAACCAGA CCGACCCGGT GAATTCCACA GTCCTGAAGG GGGTGCCACT GGGTGCGACG TTCAACATCA GCATTCACAC CACGTCTGAA GGCGTGGTAA CCGTGACGGC CGAATGCAAC GGGGTATCCG CTTCGTCGGG CGATTTGCAG CTCGACAGTA CCTGGGCTTC ACGCCTGTTC GAGTTCCACG GCGGGGTCTA CAACCAGGTC GACTACACCG ACGCAACCCC CGCCGAGGAC GGCTCGATCT GCATCATCAG CGAGCTCTCG CTCATCCATC GCTGA
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Protein sequence | MAVDISHLTI ATPVAVSSTN PVALELNGAE AIARFPSIVT VLSDGSIQFS APTKGASSKS THRTRCEWTE TQDWTLASAQ DHWNRQTMTL TKVNSAQKVV IAQMHVRGDD GPPVKVFWNK GNITLGFRRT FNQTDPVNST VLKGVPLGAT FNISIHTTSE GVVTVTAECN GVSASSGDLQ LDSTWASRLF EFHGGVYNQV DYTDATPAED GSICIISELS LIHR
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