Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3706 |
Symbol | |
ID | 1046446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4226880 |
End bp | 4227839 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637147117 |
Product | hypothetical protein |
Protein accession | NP_745839 |
Protein GI | 26990414 |
COG category | [H] Coenzyme transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00107564 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGTTAT TGGTTACAAA CCGTCGTGAC ATTACGATGG ACTACGTTGT GGCTGAGCTC CATCGACGTG AGCAGCCGTT CGTGCGTCTT AATACGGAGT TGCTTCCACA GGCAATGTGC ACAATGGCTA GTCATCCTCG CGATGCGTGG TCTATTTCTC TGGGTGGCAG AGTCGTTAGA GGCGAAGAGG TAACAGCCGC GTACTTTCGT AGACCTGGCG CACCGGTCGT ATCAGAAAAC GTGACCGATG CTGGGGAGCG TGCATACATC GAAGCGGAGT GGAGTAGCTT TCTAAAAAGC CTTTACTCAC GCTTGGACGG TCGTTGGCTT AACTCACCAT CCAAGATTTT CACGGCTGAA GATAAGCCAA TGCAGCTCAT GATGGCTCAC GAGTTGGGCT TCAACGTGCC GCTGGCAACG ATCACCAATG ACATATCGTC TGTGCAATCC ATCGCGAAGG CAGGTCAAGC GATAGGTAAG CCGCTGCGCC AAGCGGTTTT GGCGGGTGAG TTGGAGCGCG TGATCTTCAC CTCCCGCCTT GGCAGTCTAG ATGATGAACA TGCTCAAGCT ATTTCTATGA CTCCCTTCAT CGTGCAGACT GAGATTCAGA AACAGTACGA CGTGCGTGTA ACGGTGGTCG GAGAGCAGGT TTTTGCCACA GCGATCTGGT CTCAAGAGAA CCCTGAAACC GAAATCGACT GGCGGCAGGG GAGCCGTCCG GACTTGCGCC ATGAGAAAAT TGCCTTGCCT GGACTTGTAG AAAGGCAATG CGTAGAGCTT GTTCGTCGCC TTGGCCTGCG TTATGGGGCC ATTGACTTGA TCAATGACCG ATCTGGGAAA CTGTGGTTCC TAGAAATAAA TCCAAACGGT CAGTGGGCGT GGATTGAAAA TCTAACGGGT TATCCAATTG CTTCGGCAAT CGTGGATCAG TTAACGGTGA AAGCTGGTGT CCAGATTTAA
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Protein sequence | MLLLVTNRRD ITMDYVVAEL HRREQPFVRL NTELLPQAMC TMASHPRDAW SISLGGRVVR GEEVTAAYFR RPGAPVVSEN VTDAGERAYI EAEWSSFLKS LYSRLDGRWL NSPSKIFTAE DKPMQLMMAH ELGFNVPLAT ITNDISSVQS IAKAGQAIGK PLRQAVLAGE LERVIFTSRL GSLDDEHAQA ISMTPFIVQT EIQKQYDVRV TVVGEQVFAT AIWSQENPET EIDWRQGSRP DLRHEKIALP GLVERQCVEL VRRLGLRYGA IDLINDRSGK LWFLEINPNG QWAWIENLTG YPIASAIVDQ LTVKAGVQI
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