Gene PP_3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3706 
Symbol 
ID1046446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4226880 
End bp4227839 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content52% 
IMG OID637147117 
Producthypothetical protein 
Protein accessionNP_745839 
Protein GI26990414 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00107564 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGTTAT TGGTTACAAA CCGTCGTGAC ATTACGATGG ACTACGTTGT GGCTGAGCTC 
CATCGACGTG AGCAGCCGTT CGTGCGTCTT AATACGGAGT TGCTTCCACA GGCAATGTGC
ACAATGGCTA GTCATCCTCG CGATGCGTGG TCTATTTCTC TGGGTGGCAG AGTCGTTAGA
GGCGAAGAGG TAACAGCCGC GTACTTTCGT AGACCTGGCG CACCGGTCGT ATCAGAAAAC
GTGACCGATG CTGGGGAGCG TGCATACATC GAAGCGGAGT GGAGTAGCTT TCTAAAAAGC
CTTTACTCAC GCTTGGACGG TCGTTGGCTT AACTCACCAT CCAAGATTTT CACGGCTGAA
GATAAGCCAA TGCAGCTCAT GATGGCTCAC GAGTTGGGCT TCAACGTGCC GCTGGCAACG
ATCACCAATG ACATATCGTC TGTGCAATCC ATCGCGAAGG CAGGTCAAGC GATAGGTAAG
CCGCTGCGCC AAGCGGTTTT GGCGGGTGAG TTGGAGCGCG TGATCTTCAC CTCCCGCCTT
GGCAGTCTAG ATGATGAACA TGCTCAAGCT ATTTCTATGA CTCCCTTCAT CGTGCAGACT
GAGATTCAGA AACAGTACGA CGTGCGTGTA ACGGTGGTCG GAGAGCAGGT TTTTGCCACA
GCGATCTGGT CTCAAGAGAA CCCTGAAACC GAAATCGACT GGCGGCAGGG GAGCCGTCCG
GACTTGCGCC ATGAGAAAAT TGCCTTGCCT GGACTTGTAG AAAGGCAATG CGTAGAGCTT
GTTCGTCGCC TTGGCCTGCG TTATGGGGCC ATTGACTTGA TCAATGACCG ATCTGGGAAA
CTGTGGTTCC TAGAAATAAA TCCAAACGGT CAGTGGGCGT GGATTGAAAA TCTAACGGGT
TATCCAATTG CTTCGGCAAT CGTGGATCAG TTAACGGTGA AAGCTGGTGT CCAGATTTAA
 
Protein sequence
MLLLVTNRRD ITMDYVVAEL HRREQPFVRL NTELLPQAMC TMASHPRDAW SISLGGRVVR 
GEEVTAAYFR RPGAPVVSEN VTDAGERAYI EAEWSSFLKS LYSRLDGRWL NSPSKIFTAE
DKPMQLMMAH ELGFNVPLAT ITNDISSVQS IAKAGQAIGK PLRQAVLAGE LERVIFTSRL
GSLDDEHAQA ISMTPFIVQT EIQKQYDVRV TVVGEQVFAT AIWSQENPET EIDWRQGSRP
DLRHEKIALP GLVERQCVEL VRRLGLRYGA IDLINDRSGK LWFLEINPNG QWAWIENLTG
YPIASAIVDQ LTVKAGVQI