Gene PP_3651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3651 
Symbol 
ID1046245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4145914 
End bp4148097 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content64% 
IMG OID637147065 
ProductGAF sensor hybrid histidine kinase 
Protein accessionNP_745787 
Protein GI26990362 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.125923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGAT GGCTAGACGG CGGCGGGCAA ATGGCCGAAC GCATCCGCAA CCACGACTGG 
GCCAGCACTC CCCTGGGCCC GCTGGAACAT TGGCCCGACG CCCTGAAAAC CACGATGTCT
CTGTGCCTGG CCTCGCGCTT TCCGCAGGCC GTGCTGTGGG GCCCGGACTT GATCACCCTG
TACAACGATG CGTTCACGCC GATTCTCGGT CGCAAGCCCC TGGCCTTGGG CATCCCCTTC
CGCGACGTGT GGCACGAAGC CTGGGATGAA ATCAGCAGCA TGGCGGACCG TGCGTTGGCC
GGTGAAGCGG TGTACATCGA AGACTTCCCG CTGATGATCG ACCGCAACGG AGGTTTGGAG
CGGGCCTATT TCACCTTCTG CTACAGCCCG ATTCGCGGCC ATGATGGCGA GATTCTGGGC
ATGCTCGACA CGGTCACCGA AACCACCGCC AGCGTGGTCA CCAACCAGCG CCTGAACTTT
CTCGATACCC TCGGGCGAGC CGTGACCGAG GCGACCGACC CGGACCAGAT CATGGCCATC
ACCACCCGCA TGCTGGTCGA GCACCTTGGC CTGTCCAGCT GCGCCTATGC GGTGATGGAC
CCCGACGAGG ACGGTTTCAC CATTTGCGGC GATGCAGTGA CCCCCGGTTC ACCACGCCTG
GTGGGCCACT ATCACCTGCA TGACTTCGGC CGCCTGGCTG TCAGCCGCCT GCGCAGCGGC
CTGGCCCTGG TGATCAATGA CAACCTGCGC GAACTGGCCG CTGACGAGGC GGCGACTTAT
CAGGCCATCG GCATTACGGC CACCATCTGC ATGCCACTGA TCAAGGGTGG CAGGCTGACC
GCGCTGATGG CGATTCACGA CCGCGTACCC CGGGCATGGA CCGACTACGA GCAAACACTG
ATCAGCGAAG TGACCGAGCG ATGCTGGGCA CACATACAAC GGGCCCAGGC CCATGCCGAA
GTGCGCGAAG CGATGGCGGC CCTGGAAGCG CTCAACACCA CCTTGGAACA TCGCGTCGAA
GAACGCACCA CTCAGTTGCT GCACACCGAG GCCGTGCTGC GCCAAGCCCA GAAGCTGGAA
GCCATTGGCC AGCTGACCGG CGGGGTAGCC CACGACTTCA ATAACCTGCT GACCATCATC
CGCTCGTCGC TGCACTTCCT GCAGCGCCCC AACCTGGCCG AGGAGCGCCG CGAGCGCTAC
CTCAAGACCA TGTCCGACAC GGTCGACCGT GGTGCCAAAC TGACCGGTCA GCTACTGGCC
TTCGCCCGAC GCCAGGCCCT CAGCCCACAG GTGTTCGAGG CCGGGCCTCG GCTGGAGGCC
ATGGCCGACA TGCTCGACAC CGTCACTGGC GCGCGCATCC GGGTCGAGCT GCAGTTACCG
CAAGCGCCCT GCCACATCCG CGCCGACCTC AGCCAGTTGG AAACCGCGAT AATCAACCTG
ATGCTCAACG GCCGCGATGC CATGGCTGGC GAAGGTGCCT TGCAGCTGCG CCTGCAGGCC
GACCAGTGCC TGCCGGCCTT GCGCGGTCAG CCTTCACAGC CAGGCCCGTT CGCGGCGATA
TCGGTGAGCG ACAACGGAGT CGGTATTGCC ACCGAGTTGC TGGAGCGCAT CTTCGACCCG
TTCTTCACCA CCAAGGCCCC AGGTGAAGGT ACCGGGCTCG GGTTGTCGCA GGTGTTTGGT
TTCGCCAAGC AATCCGGGGG CGATGTACAG GTGAACAGCA TCCCCGGCCA GGGCACCACC
TTTACCCTGT ATCTGCCGCA AGAGGCCCCA GCTGCAGCCG CGCCCGAAGA CGCCTCGGCC
GGCAGCCAGC CACAGGTAGA GGGCGAGCGG CGACGAATAC TGGTGGTAGA AGACAATCCC
GACCTGGGCA GTTTCACAGC TCAGCTCCTC GAGGACCACG GCTACCAAAT CAGCTATGCA
CGGTCGGCAG AAGAAGCGCT GGCGCAGTTG ACTGGCCCGG CAGGTGATTT TGATGCAGTG
TTTTCCGATG TGGTCATGCC CGGCATGGGT GGCTTGGCAC TGGCCCGCGA ACTTCGCCGC
CAGCGCCCGC AGTTGCCGGT GATCCTGACT TCGGGCTATA GCGAGGCGAT TGCCGAAGGC
GGGCACCAAG GGTTCACCTT CCTGGCCAAA CCCTACTCGG CAGAACAGGT GTGCCAGATA
CTCGGCAAAG TATTCGGCCA CTGA
 
Protein sequence
MARWLDGGGQ MAERIRNHDW ASTPLGPLEH WPDALKTTMS LCLASRFPQA VLWGPDLITL 
YNDAFTPILG RKPLALGIPF RDVWHEAWDE ISSMADRALA GEAVYIEDFP LMIDRNGGLE
RAYFTFCYSP IRGHDGEILG MLDTVTETTA SVVTNQRLNF LDTLGRAVTE ATDPDQIMAI
TTRMLVEHLG LSSCAYAVMD PDEDGFTICG DAVTPGSPRL VGHYHLHDFG RLAVSRLRSG
LALVINDNLR ELAADEAATY QAIGITATIC MPLIKGGRLT ALMAIHDRVP RAWTDYEQTL
ISEVTERCWA HIQRAQAHAE VREAMAALEA LNTTLEHRVE ERTTQLLHTE AVLRQAQKLE
AIGQLTGGVA HDFNNLLTII RSSLHFLQRP NLAEERRERY LKTMSDTVDR GAKLTGQLLA
FARRQALSPQ VFEAGPRLEA MADMLDTVTG ARIRVELQLP QAPCHIRADL SQLETAIINL
MLNGRDAMAG EGALQLRLQA DQCLPALRGQ PSQPGPFAAI SVSDNGVGIA TELLERIFDP
FFTTKAPGEG TGLGLSQVFG FAKQSGGDVQ VNSIPGQGTT FTLYLPQEAP AAAAPEDASA
GSQPQVEGER RRILVVEDNP DLGSFTAQLL EDHGYQISYA RSAEEALAQL TGPAGDFDAV
FSDVVMPGMG GLALARELRR QRPQLPVILT SGYSEAIAEG GHQGFTFLAK PYSAEQVCQI
LGKVFGH