Gene PP_3624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3624 
Symbol 
ID1046366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4120994 
End bp4121782 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content62% 
IMG OID637147038 
Producthypothetical protein 
Protein accessionNP_745760 
Protein GI26990335 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.78712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGC GTTGCTTTCG CCACGTCTTG CTCCTGATGT GCCTGTCACT GCTGCCCCTG 
GCTGCAACAG CGGATGATGC ATGCCTACGG CTGACCGCCA CAGGCAACCC GGAATACCCC
CCGTACCTGT GGCGCGACCC GCTGAACCCT CAGCGACTGA TCGGTGCCAA TGCCGACCTG
CTCAAATACC TGGGCAAGCA GTTGGGGCTG GAGATAGAGG TGGTTTACGC CGGGCCGTGG
TCACGAGCCC AGGAAGAAGT GCGCACCGGG CGGATCGACT TGATGGCCGG GTATTTCCTG
ACCGAAGCGC GCCGGCAGCA TGTGGACTTC ATTGCCCCGC CGTTTTTGCG CACACCCAGC
GTCATCTGGG TGCGCCAGGA CAATGCCTTT GCCTACCAGC AATGGGCCGA CCTCAAAGGC
CGCAAGGGTG GCACTCTGGT CAACAATAGC CACGGCCAAC AGTTCGATGA ATACGCCCAG
GCCAGTCTCA CCCTCGAAGC GGTGCCCACT GCCAGGCAGG CGTTCGAGAA GCTGATGCAC
AAGCGCAGCG ATTACGTGGT GTACGAGCAG TATCCTGGCA TGGCGCTGGC GCGCACATTG
GGCATCGCAG CCACTGTGCA GGTTTTGCAG CCACCGGTGT CCAGCGAAGG GTTGTACCTG
GCAATCTCAC ATGAGTCGCC TTGCAACCGG CCACTGCTGC GTGAGGCGCT GGCGCGGGAG
ATGGCGAAGA TCGTTGGCGG GGCCTTGCCC GAGCAGTGGT TGAAACAGAA TCTGGAGCGG
TGGCAGTGA
 
Protein sequence
MIERCFRHVL LLMCLSLLPL AATADDACLR LTATGNPEYP PYLWRDPLNP QRLIGANADL 
LKYLGKQLGL EIEVVYAGPW SRAQEEVRTG RIDLMAGYFL TEARRQHVDF IAPPFLRTPS
VIWVRQDNAF AYQQWADLKG RKGGTLVNNS HGQQFDEYAQ ASLTLEAVPT ARQAFEKLMH
KRSDYVVYEQ YPGMALARTL GIAATVQVLQ PPVSSEGLYL AISHESPCNR PLLREALARE
MAKIVGGALP EQWLKQNLER WQ