Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3594 |
Symbol | |
ID | 1046385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4083855 |
End bp | 4084574 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637147008 |
Product | polar amino acid ABC transporter inner membrane subunit |
Protein accession | NP_745730 |
Protein GI | 26990305 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4215] ABC-type arginine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATC AATTGTCCTT GCTGTCATTC GCCAGCGGAG GCTGGGGCCA GGCGTTGCTG GCCGGCGCGC TGGTTACTGT TTCCCTGGCC CTGGCCTGCC TGCCCATCGG CCTGCCACTG GGCCTGGTGG TCGCGCTGGC GGCGCGCTCG CGCAAACGCC TGCCACGGGC CTGGGCCACC ACTTTTTCCA CCGTCTTCCG CGGCCTGCCC GAGCTGCTGA CGTTGCTGAT CATCTATTAC GGCTGCCAGA TCGCCGCGCA GAAGATCCTC GCCGCCATGG GCTACCAAGG TGAGTTCCTC ATCAACACCT TCCTCGCCGC GATGATCGCC TTCAGCCTGG TGTTCGCCGC GTTTTCCAGC GAGATCTGGC TGGCAGCCTT CAAGACCCTG CCCAAGGGCC AGCTGGAAGC CTGCTCGGCG CTTGGGCTTA GCAAGCGCAC CGGTTTCTTC AAGGTGCTGC TGCCACAACT GACCCGCATC GCCCTGCCCG GCTTGTCCAA CAACTGGCTG TCGCTGCTCA AGGACACCTC GCTGGTGTCG ACCATCTCGC TGGTCGACCT GATGCGCCAG ACCAACCTGG CGGTCAGCGT AACCAAGGAA CCGATGTTCT TCTACGGCGT CGCCTGCCTG GGCTACCTGC TGTTCGCGGC ACTGTCCGGG CGCGTGTTCG CCTACATCGA ACGGCGCAGC AACCGCCACC TGCAAGGAGC ACGCGCATGA
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Protein sequence | MLDQLSLLSF ASGGWGQALL AGALVTVSLA LACLPIGLPL GLVVALAARS RKRLPRAWAT TFSTVFRGLP ELLTLLIIYY GCQIAAQKIL AAMGYQGEFL INTFLAAMIA FSLVFAAFSS EIWLAAFKTL PKGQLEACSA LGLSKRTGFF KVLLPQLTRI ALPGLSNNWL SLLKDTSLVS TISLVDLMRQ TNLAVSVTKE PMFFYGVACL GYLLFAALSG RVFAYIERRS NRHLQGARA
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