Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3579 |
Symbol | |
ID | 1046324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4061069 |
End bp | 4061716 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637146994 |
Product | hypothetical protein |
Protein accession | NP_745716 |
Protein GI | 26990291 |
COG category | [S] Function unknown |
COG ID | [COG4291] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTCC ATCGTCTGAC CCGCACCCAC CCTCGCCTGA GCCTCGCCGC TGCAGTCGGC CTCGCTGGCG CCTGGCTGAT CCCCGCCGGT GATACCGTGC AGCACATCCT CGCTGGCTGG AACCTGGGGG TGTGGCTGTA CCTGCTGCTG GTGCTCTACC TGAGCTGGAC AGCCAGCCCG GAAAAGGTCC GCAAGGTCGC CGGCGTCGAA GACGAGAACG CCGGCCTGGT CCTGCTGACC GTGTGCATCG CCGCCATCGC CAGCCTTGCC GCGGTCACCC TGCAACTGGT CTCCAGCCGC GGCCTGCAAG GCACGGCCCT GGCCGTGCAC TATCTCTACA CTGGCCTGAC CGTCGCCGGT TCCTGGCTGC TGATCGGCTG CATATTCACC CTGCACTACG CCCGCCTGTT CTACACCGGG CAAAACCACG AACCCCCACT GCGCTTCGCT GATGGCGAGC GCAACCCGGA TTACTGGGAC TTCCACTACT TCTCGTTCAC CATCAGCGTG GCGGTGCAAA CCTCAGACGT GGGCGTCGCC GGGCGTGGGT TGCGGCGGGT GGTGCTGGCG CATTCGCTGG TGGGCTTCGT GTTCAATACG GCGATTCTGG GGTTCACTAT CAACATCGCC GCCGGGTTGC TGGGTTAA
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Protein sequence | MAFHRLTRTH PRLSLAAAVG LAGAWLIPAG DTVQHILAGW NLGVWLYLLL VLYLSWTASP EKVRKVAGVE DENAGLVLLT VCIAAIASLA AVTLQLVSSR GLQGTALAVH YLYTGLTVAG SWLLIGCIFT LHYARLFYTG QNHEPPLRFA DGERNPDYWD FHYFSFTISV AVQTSDVGVA GRGLRRVVLA HSLVGFVFNT AILGFTINIA AGLLG
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