Gene PP_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3579 
Symbol 
ID1046324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4061069 
End bp4061716 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID637146994 
Producthypothetical protein 
Protein accessionNP_745716 
Protein GI26990291 
COG category[S] Function unknown 
COG ID[COG4291] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCC ATCGTCTGAC CCGCACCCAC CCTCGCCTGA GCCTCGCCGC TGCAGTCGGC 
CTCGCTGGCG CCTGGCTGAT CCCCGCCGGT GATACCGTGC AGCACATCCT CGCTGGCTGG
AACCTGGGGG TGTGGCTGTA CCTGCTGCTG GTGCTCTACC TGAGCTGGAC AGCCAGCCCG
GAAAAGGTCC GCAAGGTCGC CGGCGTCGAA GACGAGAACG CCGGCCTGGT CCTGCTGACC
GTGTGCATCG CCGCCATCGC CAGCCTTGCC GCGGTCACCC TGCAACTGGT CTCCAGCCGC
GGCCTGCAAG GCACGGCCCT GGCCGTGCAC TATCTCTACA CTGGCCTGAC CGTCGCCGGT
TCCTGGCTGC TGATCGGCTG CATATTCACC CTGCACTACG CCCGCCTGTT CTACACCGGG
CAAAACCACG AACCCCCACT GCGCTTCGCT GATGGCGAGC GCAACCCGGA TTACTGGGAC
TTCCACTACT TCTCGTTCAC CATCAGCGTG GCGGTGCAAA CCTCAGACGT GGGCGTCGCC
GGGCGTGGGT TGCGGCGGGT GGTGCTGGCG CATTCGCTGG TGGGCTTCGT GTTCAATACG
GCGATTCTGG GGTTCACTAT CAACATCGCC GCCGGGTTGC TGGGTTAA
 
Protein sequence
MAFHRLTRTH PRLSLAAAVG LAGAWLIPAG DTVQHILAGW NLGVWLYLLL VLYLSWTASP 
EKVRKVAGVE DENAGLVLLT VCIAAIASLA AVTLQLVSSR GLQGTALAVH YLYTGLTVAG
SWLLIGCIFT LHYARLFYTG QNHEPPLRFA DGERNPDYWD FHYFSFTISV AVQTSDVGVA
GRGLRRVVLA HSLVGFVFNT AILGFTINIA AGLLG