Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3535 |
Symbol | ggt-1 |
ID | 1045350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4006082 |
End bp | 4007872 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637146950 |
Product | gamma-glutamyltransferase |
Protein accession | NP_745672 |
Protein GI | 26990247 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTTCT CTATCCCACT GATCAGAACG CTGTGCCTAA TGGCCATCAG CGGCTCGGTC GGTGCCGACC AGGTATTGCC CACGCCACCG GAACTGGCCT CCGGCTACCG CAGCGGTTTG CAGCCGGTGC ACGCCAGCCG GCACATGGTC GCCGCAGCCA ACCCGCTGGC CAGTGAAGCG GGGCGGGCGA TGTTGCGTGC CGGCGGCAGT GCGATTGACG CCGCCATCGC CATGCAGATG GTGCTGACAC TGGTCGAGCC ACAGTCCAGT GGGATCGGCG GCGGGGCGTT CATCCTGTAC TGGGATGGCA AGCGCGTGCA GGCATTCGAC GGGCGTGAGG CAGCACCTGC GGCGGTGACG GAAAAGCTGT TCCTGCAAGC CGATGGCACA CCCATGCCGT TCCGGGTGGC GCAGATCGGT GGGCGGTCGG TGGGCGTGCC CGGGGTGCTG CGTGCCCTGA AGCAGGCCCA CGAGCAGCAC GGCAAGTTGC CCTGGCACGC CCTGTTCGCC CCGGCCATCG CCTTGGCACG CAACGGCTTC GCGGTTTCCG AGCGCCTGCA CACACTACTG GCCGGGGACC CCTACATTGC CCGCTCACCC GCAATGGCCC GTTACTTCCT GGATGAACAG GGCAGGCCGC TGGCCGTGGG TACAATCCTG CGCAACCCTG AGTTGGCACA GACCTTGGAG CAGATCGCCG CACAGGGGCC CGAGGTGTTC TACAGCGGTG AAATTGCCGA AGCCATTGTC GCCAAGGTGC GTGGCCATGC CAATGCCGGG TATCTGTCGT TGCAGGACTT GCAGCAGTAC CAGGCCAAGG AGCGCGAGCC GTTGTGCGGC CCCTACAAGG CCTGGCAGAT CTGCGGCATG CCGCCACCTT CATCGGGTGG GGTGACCGTG CTACAGACCT TGGGCCTGCT CGACGCCGTG CAGCGCACCG CGCCGCAACG CGACCTGGCA GCGCTGCGAC CGCTGGCCAC CTCGTCCCCG GCCCGCCTGG AAGCCCCGCC GTTGGCCGTG CACCTGATCG CCGAGGCCGA GCGCCTGGCC TACGCCGATC GCGCTCAGTA CCTGGCCGAC AACGACTACG TGCCCGTCCC GGTCAAGGCC CTGACCGATT CTGCTTACCT GGCCAGCCGC GCGGCGCTGA TCGGCGAGCA CAGCATGAAG CGCGCCCGTC CGGGCCAGCC GCAAGGAGCG GACCTGGCGC TTGCGCCCGA CCGCTCGCCA CTGCGCATCT CCACCTCTCA CCTCAGTGCG GTGGATGACA ACGGCCAGGC CCTGGCCATG ACCACCTCGG TGGAGGCCGC ATTTGGCTCG CACCTGATGG TCAAGGGCTT CCTGCTCAAC AATCAGCTGA CCGACTTCTC GTTCATCCCC CACGAGCACG GCAAGCCTGT GGCCAATCGG GTGCAGCCGG GCAAACGGCC GCTGTCGGCC ATGGCGCCGA CGTTGGTGTT CTCGCGTGCC ACGGGCGAGT TTGTCGCGAG CCTCGGTTCG CCGGGTGGTT CGCAGATCAT CGGTTACGTG AACAAGGCAC TGGTCGGCCT GCTGGATTGG CGGCTCGACC CGCAGCAGGC CGCCGACCTG CCCAACTTCG GCAGCCGCAA TGCCGGCACC GAAGTGGAAG CAGGGCTGAG CAGCCCGGCG CTGATCCGCC AGTTGGCAGC CTGGGGCCAT GAGGTGACAC CGATGACCAT GACCAGCGGC ATGCAGATCA TCCAGCGCAG CGGCGAGGGT TGGTCAGGCG GTGCCGATCC CCGGCGGGAA GGAGTGGCCC TCGGTGACTA G
|
Protein sequence | MKFSIPLIRT LCLMAISGSV GADQVLPTPP ELASGYRSGL QPVHASRHMV AAANPLASEA GRAMLRAGGS AIDAAIAMQM VLTLVEPQSS GIGGGAFILY WDGKRVQAFD GREAAPAAVT EKLFLQADGT PMPFRVAQIG GRSVGVPGVL RALKQAHEQH GKLPWHALFA PAIALARNGF AVSERLHTLL AGDPYIARSP AMARYFLDEQ GRPLAVGTIL RNPELAQTLE QIAAQGPEVF YSGEIAEAIV AKVRGHANAG YLSLQDLQQY QAKEREPLCG PYKAWQICGM PPPSSGGVTV LQTLGLLDAV QRTAPQRDLA ALRPLATSSP ARLEAPPLAV HLIAEAERLA YADRAQYLAD NDYVPVPVKA LTDSAYLASR AALIGEHSMK RARPGQPQGA DLALAPDRSP LRISTSHLSA VDDNGQALAM TTSVEAAFGS HLMVKGFLLN NQLTDFSFIP HEHGKPVANR VQPGKRPLSA MAPTLVFSRA TGEFVASLGS PGGSQIIGYV NKALVGLLDW RLDPQQAADL PNFGSRNAGT EVEAGLSSPA LIRQLAAWGH EVTPMTMTSG MQIIQRSGEG WSGGADPRRE GVALGD
|
| |