Gene PP_3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3535 
Symbolggt-1 
ID1045350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4006082 
End bp4007872 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content67% 
IMG OID637146950 
Productgamma-glutamyltransferase 
Protein accessionNP_745672 
Protein GI26990247 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0405] Gamma-glutamyltransferase 
TIGRFAM ID[TIGR00066] gamma-glutamyltranspeptidase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCT CTATCCCACT GATCAGAACG CTGTGCCTAA TGGCCATCAG CGGCTCGGTC 
GGTGCCGACC AGGTATTGCC CACGCCACCG GAACTGGCCT CCGGCTACCG CAGCGGTTTG
CAGCCGGTGC ACGCCAGCCG GCACATGGTC GCCGCAGCCA ACCCGCTGGC CAGTGAAGCG
GGGCGGGCGA TGTTGCGTGC CGGCGGCAGT GCGATTGACG CCGCCATCGC CATGCAGATG
GTGCTGACAC TGGTCGAGCC ACAGTCCAGT GGGATCGGCG GCGGGGCGTT CATCCTGTAC
TGGGATGGCA AGCGCGTGCA GGCATTCGAC GGGCGTGAGG CAGCACCTGC GGCGGTGACG
GAAAAGCTGT TCCTGCAAGC CGATGGCACA CCCATGCCGT TCCGGGTGGC GCAGATCGGT
GGGCGGTCGG TGGGCGTGCC CGGGGTGCTG CGTGCCCTGA AGCAGGCCCA CGAGCAGCAC
GGCAAGTTGC CCTGGCACGC CCTGTTCGCC CCGGCCATCG CCTTGGCACG CAACGGCTTC
GCGGTTTCCG AGCGCCTGCA CACACTACTG GCCGGGGACC CCTACATTGC CCGCTCACCC
GCAATGGCCC GTTACTTCCT GGATGAACAG GGCAGGCCGC TGGCCGTGGG TACAATCCTG
CGCAACCCTG AGTTGGCACA GACCTTGGAG CAGATCGCCG CACAGGGGCC CGAGGTGTTC
TACAGCGGTG AAATTGCCGA AGCCATTGTC GCCAAGGTGC GTGGCCATGC CAATGCCGGG
TATCTGTCGT TGCAGGACTT GCAGCAGTAC CAGGCCAAGG AGCGCGAGCC GTTGTGCGGC
CCCTACAAGG CCTGGCAGAT CTGCGGCATG CCGCCACCTT CATCGGGTGG GGTGACCGTG
CTACAGACCT TGGGCCTGCT CGACGCCGTG CAGCGCACCG CGCCGCAACG CGACCTGGCA
GCGCTGCGAC CGCTGGCCAC CTCGTCCCCG GCCCGCCTGG AAGCCCCGCC GTTGGCCGTG
CACCTGATCG CCGAGGCCGA GCGCCTGGCC TACGCCGATC GCGCTCAGTA CCTGGCCGAC
AACGACTACG TGCCCGTCCC GGTCAAGGCC CTGACCGATT CTGCTTACCT GGCCAGCCGC
GCGGCGCTGA TCGGCGAGCA CAGCATGAAG CGCGCCCGTC CGGGCCAGCC GCAAGGAGCG
GACCTGGCGC TTGCGCCCGA CCGCTCGCCA CTGCGCATCT CCACCTCTCA CCTCAGTGCG
GTGGATGACA ACGGCCAGGC CCTGGCCATG ACCACCTCGG TGGAGGCCGC ATTTGGCTCG
CACCTGATGG TCAAGGGCTT CCTGCTCAAC AATCAGCTGA CCGACTTCTC GTTCATCCCC
CACGAGCACG GCAAGCCTGT GGCCAATCGG GTGCAGCCGG GCAAACGGCC GCTGTCGGCC
ATGGCGCCGA CGTTGGTGTT CTCGCGTGCC ACGGGCGAGT TTGTCGCGAG CCTCGGTTCG
CCGGGTGGTT CGCAGATCAT CGGTTACGTG AACAAGGCAC TGGTCGGCCT GCTGGATTGG
CGGCTCGACC CGCAGCAGGC CGCCGACCTG CCCAACTTCG GCAGCCGCAA TGCCGGCACC
GAAGTGGAAG CAGGGCTGAG CAGCCCGGCG CTGATCCGCC AGTTGGCAGC CTGGGGCCAT
GAGGTGACAC CGATGACCAT GACCAGCGGC ATGCAGATCA TCCAGCGCAG CGGCGAGGGT
TGGTCAGGCG GTGCCGATCC CCGGCGGGAA GGAGTGGCCC TCGGTGACTA G
 
Protein sequence
MKFSIPLIRT LCLMAISGSV GADQVLPTPP ELASGYRSGL QPVHASRHMV AAANPLASEA 
GRAMLRAGGS AIDAAIAMQM VLTLVEPQSS GIGGGAFILY WDGKRVQAFD GREAAPAAVT
EKLFLQADGT PMPFRVAQIG GRSVGVPGVL RALKQAHEQH GKLPWHALFA PAIALARNGF
AVSERLHTLL AGDPYIARSP AMARYFLDEQ GRPLAVGTIL RNPELAQTLE QIAAQGPEVF
YSGEIAEAIV AKVRGHANAG YLSLQDLQQY QAKEREPLCG PYKAWQICGM PPPSSGGVTV
LQTLGLLDAV QRTAPQRDLA ALRPLATSSP ARLEAPPLAV HLIAEAERLA YADRAQYLAD
NDYVPVPVKA LTDSAYLASR AALIGEHSMK RARPGQPQGA DLALAPDRSP LRISTSHLSA
VDDNGQALAM TTSVEAAFGS HLMVKGFLLN NQLTDFSFIP HEHGKPVANR VQPGKRPLSA
MAPTLVFSRA TGEFVASLGS PGGSQIIGYV NKALVGLLDW RLDPQQAADL PNFGSRNAGT
EVEAGLSSPA LIRQLAAWGH EVTPMTMTSG MQIIQRSGEG WSGGADPRRE GVALGD