| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3439 |
|---|
| Symbol | |
|---|
| ID | 1046513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 3895893 |
|---|
| End bp | 3896741 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637146855 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | NP_745577 |
|---|
| Protein GI | 26990152 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGG TATCACGGTT TTGGCGCGAC CCTGCCTTGC CGTTCGTCGA AGCCCGACAG
GTAGGGGACG GGCGCAAGGT GTGCTACGCC GCGCACTCTC ACGAGAGTTT CTCCATCGGG
GTGATCACGG GGGGACGTAG CACTTACATC AACAGTGACC AGTGCGTTGA GGTTGGGGCG
GGTACCACGG TGTTGATGAA CCCAGGCGTG GTGCACACCT GCAACCCTGT TGCCGGGGAA
CCCTGGTCTT ACCTGATGCT GTTCGTCGAT CAGCCTTGGT TGCAAGCAGT GGGTTTTACC
CTGCCCACGC AGACCTGGAG CCGCTCGCCT GTGTTGTATC GGCGGCTGTT GCAGGCCTTT
GCCGACCTGT TCGATGCCAG GCTGCCTGAT CGCGAAGCCC GCCTGGCGGC CCTGTTTCAC
GAGTTGCCGG GCATGCTTGG CGGTAATGCC AGCGAGGGTG GCGAGGGCAA CCCACGGCTG
GATGCAGCGG CAGCGTTCAT ACGCGCCCAT CGCAGTGACC CGCTCAGCCT CGAGGACATC
TGCGGGGCTT GCGGCCTGTC TCGGTCCTAC CTGATTCGTG CCTTTCGCCA ACGCTTCGGC
CTGACGCCGC ATGGCTACCT GCTAGACCAG CGCGTGCAAC TGGCCCGGGC GCAGTTGCGC
CAGGGCCGCT CAATTGCTGA AGTTGCACAG GAGGCCGGGT TCGCTGATCA GGCACACCTG
CAGCGGGCAT TCAAACAGCA CCTGGCGGCG ACACCGGGGC ATTACAGAAA TGCCGTCGCT
AGCCTGGGCG CTCCTGCAGG AGCCGTGCAA GCCTTAAAGG ATCAGGTAAA CCGCGCTGGC
GACCAGTAA
|
|---|
| Protein sequence | MIEVSRFWRD PALPFVEARQ VGDGRKVCYA AHSHESFSIG VITGGRSTYI NSDQCVEVGA
GTTVLMNPGV VHTCNPVAGE PWSYLMLFVD QPWLQAVGFT LPTQTWSRSP VLYRRLLQAF
ADLFDARLPD REARLAALFH ELPGMLGGNA SEGGEGNPRL DAAAAFIRAH RSDPLSLEDI
CGACGLSRSY LIRAFRQRFG LTPHGYLLDQ RVQLARAQLR QGRSIAEVAQ EAGFADQAHL
QRAFKQHLAA TPGHYRNAVA SLGAPAGAVQ ALKDQVNRAG DQ
|
|---|
| |