| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3436 |
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| Symbol | rarD-2 |
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| ID | 1046480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3892634 |
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| End bp | 3893521 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637146852 |
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| Product | RarD protein, DMT superfamily transporter |
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| Protein accession | NP_745574 |
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| Protein GI | 26990149 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.509712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAAAAG GCATTGTTTC ATCGGTCATG GCGTCCTGCC TGTTCGCTGT GATGTACTTC
TATACCTCCC TGCTCAAGCC ACTCGATGGC GAAGAAATCT TTGGCTGGCG CACCCTGCTG
ACACTGCCCT GCCTCACCTT GTTCATGCTT GTCTCGAAAG ACTGGAAGCG GGTGGGCGAA
CTGATGGGCC GGGTAAAACG CACGCCGGTG CTGTTGCTCG GCATGGTCGG CACGTCCTGG
CTGATGGGGG TGCAACTGTG GCTGTTTCTC TGGGCGCCCC TGCATGGGCG CAGCCTGGAA
GTGTCGATGG GTTACTTCCT GCTGCCACTG GCCATGGTCC TGACCGGGCG GCTGGTATAT
GGCGAGCGGC TGTCACGCCT GCAGACGGTA GCCGTGGCCT GCGCCGCACT GGGCGTGGGC
CACGAGCTGT ACCAAAATGG CAGTTTTGCC TGGGAAACCC TGCTGGTAAC GATCGGCTAC
CCGGTCTACT TCGTGCTGCG CCGACGCTGC CGCACCGACA ACCTGGGCGG CCTGTGGTGT
GACATGTGCC TGCTGCTGCC GTGGGCGCTG TACTTCGTGA TCCAGAGCCC ACTGTCCAGT
GCTGACCTGC AAGCACACCC CGGGCTGTAC GTGTTGGTAC CGATCCTTGG CGCGATCAGC
GCTTCGGCGC TTATCGCCTA CGTGCTGGCC AGCCGCATGC TGCCATTCAG CCTGTTCGGC
CTGCTCAGCT ACGTCGAACC CGTGCTGCTG GTAGGCGTGG CGTTGCTGCT GGGCGAAACC
ATCGGCCCGG ATCAGTGGCT GACCTACCTG CCAATCTGGG CCGCAGTACT GGTGCTGGTG
CTTGAGGGCT TCAAGCACCT GCTACGTCAG CGTCGCCGTT CGGTGTAA
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| Protein sequence | MSKGIVSSVM ASCLFAVMYF YTSLLKPLDG EEIFGWRTLL TLPCLTLFML VSKDWKRVGE
LMGRVKRTPV LLLGMVGTSW LMGVQLWLFL WAPLHGRSLE VSMGYFLLPL AMVLTGRLVY
GERLSRLQTV AVACAALGVG HELYQNGSFA WETLLVTIGY PVYFVLRRRC RTDNLGGLWC
DMCLLLPWAL YFVIQSPLSS ADLQAHPGLY VLVPILGAIS ASALIAYVLA SRMLPFSLFG
LLSYVEPVLL VGVALLLGET IGPDQWLTYL PIWAAVLVLV LEGFKHLLRQ RRRSV
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