Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3391 |
Symbol | |
ID | 1046522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3841565 |
End bp | 3842881 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637146809 |
Product | tartrate MFS transporter, putative |
Protein accession | NP_745531 |
Protein GI | 26990106 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.200595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.335671 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGCTT TGACCGGCGA ACTGGCGCGT GAGCGCAACG ACAGTCACAT CAATGAGCTG CTGCTATACC GCCGTGTGGC CTGGCGCATC ATGCCGCTGG CTATCATCTG CTTCCTGTTC TCCTACTTCG ACCGCATCAA CATCAGTTTT GCGAAGACAC AAATGCAGCA GGAACTGGGC CTCAGCGATG CCGCCTACGG CCTGGCCGCG AGCATGTTCT TCGTCGGCTA CGTGCTGTTC GAAGTGCCCA GCAGTCTTGG CCTGAAACGC TACGGGGCTC CGGCCTGGAT CTGCCGGATC ATGGTGTCCT GGGGCCTGGC GACGGCTGCG CTGGTATTTG CCTATACCCA GTACACGCTG TACTTCCTAC GCTTTCTGAT CGGCGTCATG GAGGCCGGTT TCGGCCCGGC GATCCTGTTC TACCTGGCAT GCTGGTTCCC GCGCAAGCAC CTGGCGAAGA TGAATGGCCT GTGGTTCCTG GCGGTGCCGC TGGCCGGAGC GGTGGGTGGC CCGGCTGCGG GCTTTTTGCT GGGGACAATG GACGGCGTGT TAGGCCTCGC TGGCTGGCAC TGGTTGTTCC TGATGTCCGG GCTGCCGTGT GTGCTGCTGG GCCTGCTGGT GCTGTGGAAG CTGGACCGCG ATATCGAGGC GGCGAAATGG TTGAGCCGCG AGGAGAAGGA CCTGCTGGCG GAGAACCTTG CCCAGGACAA ACGCACCGCA AAACCGATAC TCGGCTCGAT CTGGCGGGTG TTGCTGACCC GTGAAGTGGC GATCATGGCG TTTATCTACT ACGTGGTCAA AACCGCGTCC TACGGGCTTA ATTTCTGGAT GCCGCACCTG ATCAAGTCCT CGGGGGTGCA AGACATGCTC TGGGTTGGCG TGCTGTCGGC ATTGCCCTAT GCGGTAGCGT GCATCGGCAT GGTGTTGCTG ACTCGTCACT CCGACCGCAC CGGCGAGCGC AAGCGCTATC TGGTGTACTG CCTGCTGGCG GCCGCCGTCG GTTACCTGCT GGCGTGCCTG TTCTCCGACT CTCCCTTCGC GATGATGACC GCGCTGGTGC TGGCCACTGC GGGCACCTTT ATCGCTATCC CGATCTTCTG GACCATTCCA CAGTCGACGT TCTCGGGGCT GGCAATTGCC ACCGGCACCG CCGCGATCAA CTCGGTGGGA CAGCTGAGCG GCATCGTTGC ACCAGTGATG GTGGGCAAGA TCAATGACCT TACCGACAGT ACCTACATGG GCATGCTGTC AATCGCGCCG CTGATCCTGG TCGCATGCCT GGTGGTGATG CGTTACGTGC GCAACCCCAA AAGCTGA
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Protein sequence | MVALTGELAR ERNDSHINEL LLYRRVAWRI MPLAIICFLF SYFDRINISF AKTQMQQELG LSDAAYGLAA SMFFVGYVLF EVPSSLGLKR YGAPAWICRI MVSWGLATAA LVFAYTQYTL YFLRFLIGVM EAGFGPAILF YLACWFPRKH LAKMNGLWFL AVPLAGAVGG PAAGFLLGTM DGVLGLAGWH WLFLMSGLPC VLLGLLVLWK LDRDIEAAKW LSREEKDLLA ENLAQDKRTA KPILGSIWRV LLTREVAIMA FIYYVVKTAS YGLNFWMPHL IKSSGVQDML WVGVLSALPY AVACIGMVLL TRHSDRTGER KRYLVYCLLA AAVGYLLACL FSDSPFAMMT ALVLATAGTF IAIPIFWTIP QSTFSGLAIA TGTAAINSVG QLSGIVAPVM VGKINDLTDS TYMGMLSIAP LILVACLVVM RYVRNPKS
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