Gene PP_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3360 
Symbol 
ID1047001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3799663 
End bp3800787 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content63% 
IMG OID637146778 
Producthypothetical protein 
Protein accessionNP_745500 
Protein GI26990075 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC GCATCATCGC GTTTTTCACC GAAACCACCG TATTCGGCAT CTCCATTCTC 
AATCTGCTGG TGGCGCTGAC AGTCGCCACC TTGGTCTTCC TGGTCGCCCG TGCCGCCATC
AGTTTCCTGA TGCGCCGGGT ACGGCGCTGG TCCGAACACG AAGGCCCACT GAGCCAGATA
ATGGCCAAGG TGCTTTCCGG CACCAGCAAC TTTCTGTTGT TGCTGGCCTC CTTGCTGGTG
GGCCTGAGCA TGCTCGACCT GCCCGAGCGC TGGCTGACCA GGGTCAGCAG CCTGTGGTTC
GTGGTCGCGG CCTTGCAGAT TGGCCTGTGG GCCAACCGCG CCATCGGCCT GGGCCTGAGC
CGTTACTTCG CCCGCCACCG TACCGACGGC CTGAACCAGG GCAGCGCACT GGCAACCCTT
TCAGCCTGGG GCGCGCGGGT CCTGTTGTGG TCAGTCGTAG TGCTGGCGAT GCTGTCGAAC
CTGGGGGTGA ACATCACCGC CTTCGTCGCC AGCCTGGGCG TGGGCGGCAT CGCAGTGGCG
CTGGCTGTGC AGAATATCCT TGGCGACCTG TTCGCTTCGT TGTCGATCGC CGTGGACAAG
CCGTTCGAGA TCGGTGACTT CATCGTCATC GGGCCCCTGG CGGGCACCGT TGAGCACGTC
GGCCTCAAAA CCACACGCAT CCGCAGCCTC GGCGGCGAAC AGATCGTCAT GGCCAACGCC
AGCATGATCA GCAGCACCAT CCAGAATTAC AAGCGCCTGC AAGAGCGTCG CATCGTGTTC
GAGTTCGGGC TTTCCTACGA CACGCCCACC GAGGCCGTGA AGAAAGCGCC AGCCATCGTA
GAAGACGCCA TCAAGGCCCA GGAGCAGGCG CGTTTCGATC GCGCTCACCT GCGCGGCTTC
GGCAAAGAGG CGCTGGAGTT CGAGTGTGTC TACATCGTCC AGGACCCAGG CTACAACCTT
TACATGGACA TTCAGCAGGC GATCAACTTC AGGCTGCTGG AGCGGTTCTC GCAAATCGGC
GCCAAGTTCG CCGTGCCGGT GCGCGCGATC AAGGTCACGG CATTGCCAGA GGCGTCCGGC
CTGCATGGCC AGGCTCGCGA AGGCCTGAGC ATCAGGGGCG CTTGA
 
Protein sequence
MNDRIIAFFT ETTVFGISIL NLLVALTVAT LVFLVARAAI SFLMRRVRRW SEHEGPLSQI 
MAKVLSGTSN FLLLLASLLV GLSMLDLPER WLTRVSSLWF VVAALQIGLW ANRAIGLGLS
RYFARHRTDG LNQGSALATL SAWGARVLLW SVVVLAMLSN LGVNITAFVA SLGVGGIAVA
LAVQNILGDL FASLSIAVDK PFEIGDFIVI GPLAGTVEHV GLKTTRIRSL GGEQIVMANA
SMISSTIQNY KRLQERRIVF EFGLSYDTPT EAVKKAPAIV EDAIKAQEQA RFDRAHLRGF
GKEALEFECV YIVQDPGYNL YMDIQQAINF RLLERFSQIG AKFAVPVRAI KVTALPEASG
LHGQAREGLS IRGA