Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3360 |
Symbol | |
ID | 1047001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3799663 |
End bp | 3800787 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637146778 |
Product | hypothetical protein |
Protein accession | NP_745500 |
Protein GI | 26990075 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGACC GCATCATCGC GTTTTTCACC GAAACCACCG TATTCGGCAT CTCCATTCTC AATCTGCTGG TGGCGCTGAC AGTCGCCACC TTGGTCTTCC TGGTCGCCCG TGCCGCCATC AGTTTCCTGA TGCGCCGGGT ACGGCGCTGG TCCGAACACG AAGGCCCACT GAGCCAGATA ATGGCCAAGG TGCTTTCCGG CACCAGCAAC TTTCTGTTGT TGCTGGCCTC CTTGCTGGTG GGCCTGAGCA TGCTCGACCT GCCCGAGCGC TGGCTGACCA GGGTCAGCAG CCTGTGGTTC GTGGTCGCGG CCTTGCAGAT TGGCCTGTGG GCCAACCGCG CCATCGGCCT GGGCCTGAGC CGTTACTTCG CCCGCCACCG TACCGACGGC CTGAACCAGG GCAGCGCACT GGCAACCCTT TCAGCCTGGG GCGCGCGGGT CCTGTTGTGG TCAGTCGTAG TGCTGGCGAT GCTGTCGAAC CTGGGGGTGA ACATCACCGC CTTCGTCGCC AGCCTGGGCG TGGGCGGCAT CGCAGTGGCG CTGGCTGTGC AGAATATCCT TGGCGACCTG TTCGCTTCGT TGTCGATCGC CGTGGACAAG CCGTTCGAGA TCGGTGACTT CATCGTCATC GGGCCCCTGG CGGGCACCGT TGAGCACGTC GGCCTCAAAA CCACACGCAT CCGCAGCCTC GGCGGCGAAC AGATCGTCAT GGCCAACGCC AGCATGATCA GCAGCACCAT CCAGAATTAC AAGCGCCTGC AAGAGCGTCG CATCGTGTTC GAGTTCGGGC TTTCCTACGA CACGCCCACC GAGGCCGTGA AGAAAGCGCC AGCCATCGTA GAAGACGCCA TCAAGGCCCA GGAGCAGGCG CGTTTCGATC GCGCTCACCT GCGCGGCTTC GGCAAAGAGG CGCTGGAGTT CGAGTGTGTC TACATCGTCC AGGACCCAGG CTACAACCTT TACATGGACA TTCAGCAGGC GATCAACTTC AGGCTGCTGG AGCGGTTCTC GCAAATCGGC GCCAAGTTCG CCGTGCCGGT GCGCGCGATC AAGGTCACGG CATTGCCAGA GGCGTCCGGC CTGCATGGCC AGGCTCGCGA AGGCCTGAGC ATCAGGGGCG CTTGA
|
Protein sequence | MNDRIIAFFT ETTVFGISIL NLLVALTVAT LVFLVARAAI SFLMRRVRRW SEHEGPLSQI MAKVLSGTSN FLLLLASLLV GLSMLDLPER WLTRVSSLWF VVAALQIGLW ANRAIGLGLS RYFARHRTDG LNQGSALATL SAWGARVLLW SVVVLAMLSN LGVNITAFVA SLGVGGIAVA LAVQNILGDL FASLSIAVDK PFEIGDFIVI GPLAGTVEHV GLKTTRIRSL GGEQIVMANA SMISSTIQNY KRLQERRIVF EFGLSYDTPT EAVKKAPAIV EDAIKAQEQA RFDRAHLRGF GKEALEFECV YIVQDPGYNL YMDIQQAINF RLLERFSQIG AKFAVPVRAI KVTALPEASG LHGQAREGLS IRGA
|
| |