| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3344 |
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| Symbol | nikC |
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| ID | 1046990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3782061 |
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| End bp | 3782906 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637146762 |
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| Product | nickel transporter permease NikC |
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| Protein accession | NP_745484 |
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| Protein GI | 26990059 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR02790] nickel ABC transporter, permease subunit NikC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGC ACGCTGCCCT GCGTCAGCCA TTGCTGCTGC GCCGCCCCAG CCTGATGATC
GGCCTGGCCC TGGTCGGCCT GCTGGCGGTG CTGGCGCTGT TCGGCCACTG GATCGCCCCG
CATGACCCCG ACCTGGTCGA CCTCGGCCAG CGCCTGCAGG CGCCAGACGC CCGTCACTGG
CTGGGCACAG ACCACCTCGG GCGCGACCTG CTTTCGCGGT TGATCGTCGG CACGCGCCTG
TCCTTGGGCA GCGTGATGCT GACCCTGGCG CTGGTACTGG CCCTGGGGCT CGCGGTCGGC
GGTGTGGCCG GGTTCGTAGG CGGGCGCACC GACCTGCTGC TGATGCGCCT GTGCGACATG
TTCATGACCT TCCCCACGCT GGTACTGGCA TTTTTCTTCG TCACCTTGCT GGGCACTGGC
CTGAGCAACG TGATCATCGC CATCGCCCTG TCCCACTGGG CCTGGTATGC GCGCATGGTG
CGCGGCCTGG TGATTGCCCA GCGCGGCCGC GAATACGTAT TGGCTTCACG CCTGGCCGGC
GCTTCACGCT GGGCGCGGCT GCGCCAGCAT GTGCTGCCCA ATATCGCCGG CCCGTTGCTG
GTGCTGGCAA CCATGGACAT CGGCCACATG ATGCTGCACG TCTCCGGCCT GTCGTTCCTT
GGCCTCGGGG TGGCGCCCCC CACCGCCGAA TGGGGCGTGA TGATCAACGA CGCCAAGGAA
TTCATCTGGA CGCAGCCACA ACTGCTGCTG TTGCCAGGGC TGATGATCTT CTTCTCGGTG
ATGGCCTTCA ACCTGCTGGG CGATGCGCTG CGCGACCGCC TGGACCCTGC ACAGGAGCGC
CATTGA
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| Protein sequence | MSVHAALRQP LLLRRPSLMI GLALVGLLAV LALFGHWIAP HDPDLVDLGQ RLQAPDARHW
LGTDHLGRDL LSRLIVGTRL SLGSVMLTLA LVLALGLAVG GVAGFVGGRT DLLLMRLCDM
FMTFPTLVLA FFFVTLLGTG LSNVIIAIAL SHWAWYARMV RGLVIAQRGR EYVLASRLAG
ASRWARLRQH VLPNIAGPLL VLATMDIGHM MLHVSGLSFL GLGVAPPTAE WGVMINDAKE
FIWTQPQLLL LPGLMIFFSV MAFNLLGDAL RDRLDPAQER H
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