Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3329 |
Symbol | |
ID | 1046976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3766565 |
End bp | 3767854 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637146749 |
Product | hypothetical protein |
Protein accession | NP_745471 |
Protein GI | 26990046 |
COG category | [S] Function unknown |
COG ID | [COG4325] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTCATGA TAGCTCGCTG GCGTTGGTTG GCTACGCGAA TTGCCAAGCG TCTCTGGTTC AGAGCAACGC TTTTCTCCCT GTTGGGGGTG GTTACCGCGC TACTGGCCAT GGTGTTCAAG GATGCAGTGC CGGTCAGCTT GCCTGCACGT ATCGGTGCAG ATGCCGTTGA CAAGATATTG GGCATCATCG CCTCCAGCAT GCTTGCCGTC ACGACGTTTT CGCTCAGTAC AATGGTCTCG GCCTACAGTG CCGCCAGCAG TGGCGTAACC CCGCGCGCCA CTTCGTTGGT CATGGAGGAC GCCACGACCC AGAACGCTCT GGCGACCTTC ATCGGGTCCT TTCTCTTCAG CCTCGTCGGC ATCATTGCAC TGAGCACCGG AGCCTACGGT ACACAAGGTC GTGTAGTGCT TTTCACCGTG ACGATTGCAG TGGTGGTCCT GATCATCTAC ACCTTGCTGC GCTGGATTGA TCACCTCTCC AAACTAGGGC GCGTAGGCGA GACGATCGAC CGTGTCGAAA AAGCAGTGAT CAAAGCCATC GAGCAGCGTG TTGAACACCC GTTTCTGGGC GCTGCAGCCT ACCCGCCTGA CCTCAAGCTT CCTGGGGTAA CCCATGAAGT GAAAAGCCGC CAGACCGGCT ATGTACAGCA CATCGATGTC CTCACGCTGA GCAAGATTGC AACGCGCACC GAGATTCGAA TTTTCCTCGA AGTTCTGCCT GGCACCTTTG TACATGAGGG TATGGTGGTG GCACGGGCCT TGGCCGTGAA TGGCGAGCCG CTCGATGACA CTGGCGCGCT GGACATCGAG ATGCTCGCTG CCGTGACCGT CGGCCTCAGG AGAACGTTCG AGCATGACCC GCGCTTCGGG CTTTCGGTGT TGTCAGAGAT CGCCTCGCGA GCGCTTTCTC CAGCGGTAAA TGATCCCGGT ACAGCCATCG ACATCATTGG CCGCGGCATT CGCTGCCTGA CGTGTTGGGG GAAACTGCAT CCCGTGGCGC AAAGCACGGA TAACAAATGC CCGCAGGTCT ATGTTCGTGC ACTGCTGGCG GATGACCTGT TTGACGATTT TTTTGCGCCG ATCAGCCGGG ACGGCGCGGC TTTGCACGAG GTCAATCTGC GCTTGATCAA AGCCCTGGTC AGCCTGGCGC GCATCAATCC CCGCGCATTT CAACCCGCCT GCAGCCGGCA TGCCGCGCGC TTGCTTGCAC ACGCGGGCAG TGGGCTTGTA CTTCAACAGG ACAAGGACGA ACTCCGCGCG CTCGCTGCCG AACTCATCGG TGTTCAATAA
|
Protein sequence | MFMIARWRWL ATRIAKRLWF RATLFSLLGV VTALLAMVFK DAVPVSLPAR IGADAVDKIL GIIASSMLAV TTFSLSTMVS AYSAASSGVT PRATSLVMED ATTQNALATF IGSFLFSLVG IIALSTGAYG TQGRVVLFTV TIAVVVLIIY TLLRWIDHLS KLGRVGETID RVEKAVIKAI EQRVEHPFLG AAAYPPDLKL PGVTHEVKSR QTGYVQHIDV LTLSKIATRT EIRIFLEVLP GTFVHEGMVV ARALAVNGEP LDDTGALDIE MLAAVTVGLR RTFEHDPRFG LSVLSEIASR ALSPAVNDPG TAIDIIGRGI RCLTCWGKLH PVAQSTDNKC PQVYVRALLA DDLFDDFFAP ISRDGAALHE VNLRLIKALV SLARINPRAF QPACSRHAAR LLAHAGSGLV LQQDKDELRA LAAELIGVQ
|
| |