Gene PP_3329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3329 
Symbol 
ID1046976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3766565 
End bp3767854 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content59% 
IMG OID637146749 
Producthypothetical protein 
Protein accessionNP_745471 
Protein GI26990046 
COG category[S] Function unknown 
COG ID[COG4325] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCATGA TAGCTCGCTG GCGTTGGTTG GCTACGCGAA TTGCCAAGCG TCTCTGGTTC 
AGAGCAACGC TTTTCTCCCT GTTGGGGGTG GTTACCGCGC TACTGGCCAT GGTGTTCAAG
GATGCAGTGC CGGTCAGCTT GCCTGCACGT ATCGGTGCAG ATGCCGTTGA CAAGATATTG
GGCATCATCG CCTCCAGCAT GCTTGCCGTC ACGACGTTTT CGCTCAGTAC AATGGTCTCG
GCCTACAGTG CCGCCAGCAG TGGCGTAACC CCGCGCGCCA CTTCGTTGGT CATGGAGGAC
GCCACGACCC AGAACGCTCT GGCGACCTTC ATCGGGTCCT TTCTCTTCAG CCTCGTCGGC
ATCATTGCAC TGAGCACCGG AGCCTACGGT ACACAAGGTC GTGTAGTGCT TTTCACCGTG
ACGATTGCAG TGGTGGTCCT GATCATCTAC ACCTTGCTGC GCTGGATTGA TCACCTCTCC
AAACTAGGGC GCGTAGGCGA GACGATCGAC CGTGTCGAAA AAGCAGTGAT CAAAGCCATC
GAGCAGCGTG TTGAACACCC GTTTCTGGGC GCTGCAGCCT ACCCGCCTGA CCTCAAGCTT
CCTGGGGTAA CCCATGAAGT GAAAAGCCGC CAGACCGGCT ATGTACAGCA CATCGATGTC
CTCACGCTGA GCAAGATTGC AACGCGCACC GAGATTCGAA TTTTCCTCGA AGTTCTGCCT
GGCACCTTTG TACATGAGGG TATGGTGGTG GCACGGGCCT TGGCCGTGAA TGGCGAGCCG
CTCGATGACA CTGGCGCGCT GGACATCGAG ATGCTCGCTG CCGTGACCGT CGGCCTCAGG
AGAACGTTCG AGCATGACCC GCGCTTCGGG CTTTCGGTGT TGTCAGAGAT CGCCTCGCGA
GCGCTTTCTC CAGCGGTAAA TGATCCCGGT ACAGCCATCG ACATCATTGG CCGCGGCATT
CGCTGCCTGA CGTGTTGGGG GAAACTGCAT CCCGTGGCGC AAAGCACGGA TAACAAATGC
CCGCAGGTCT ATGTTCGTGC ACTGCTGGCG GATGACCTGT TTGACGATTT TTTTGCGCCG
ATCAGCCGGG ACGGCGCGGC TTTGCACGAG GTCAATCTGC GCTTGATCAA AGCCCTGGTC
AGCCTGGCGC GCATCAATCC CCGCGCATTT CAACCCGCCT GCAGCCGGCA TGCCGCGCGC
TTGCTTGCAC ACGCGGGCAG TGGGCTTGTA CTTCAACAGG ACAAGGACGA ACTCCGCGCG
CTCGCTGCCG AACTCATCGG TGTTCAATAA
 
Protein sequence
MFMIARWRWL ATRIAKRLWF RATLFSLLGV VTALLAMVFK DAVPVSLPAR IGADAVDKIL 
GIIASSMLAV TTFSLSTMVS AYSAASSGVT PRATSLVMED ATTQNALATF IGSFLFSLVG
IIALSTGAYG TQGRVVLFTV TIAVVVLIIY TLLRWIDHLS KLGRVGETID RVEKAVIKAI
EQRVEHPFLG AAAYPPDLKL PGVTHEVKSR QTGYVQHIDV LTLSKIATRT EIRIFLEVLP
GTFVHEGMVV ARALAVNGEP LDDTGALDIE MLAAVTVGLR RTFEHDPRFG LSVLSEIASR
ALSPAVNDPG TAIDIIGRGI RCLTCWGKLH PVAQSTDNKC PQVYVRALLA DDLFDDFFAP
ISRDGAALHE VNLRLIKALV SLARINPRAF QPACSRHAAR LLAHAGSGLV LQQDKDELRA
LAAELIGVQ