Gene PP_3328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3328 
Symbol 
ID1046973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3765152 
End bp3765565 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content50% 
IMG OID637146748 
Productring-cleaving dioxygenase, putative 
Protein accessionNP_745470 
Protein GI26990045 
COG category[R] General function prediction only 
COG ID[COG3565] Predicted dioxygenase of extradiol dioxygenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.300318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.894596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGT TATTTCATGT TTCATACCAT GTTACAGATC TCGAAGCATC TCGTAACTTC 
TACGGTAACA TTCTCGGCTG CAAAGAAGGC CGCACGAGTG AAACTTATGT GGATTACGAT
TTCTTCGGTC ACCAGATTTC GCTTCACAAA GGTGTTCCTT TTCCAACTAC CCGTACTGGT
AAAGTCGGCG ACCATGAAGT GTTGATGCCG CATATCGGCT TGGTGCTGCA TCTGGATGAC
TGGTTCGCGA TGGCAGACCG CCTGGCGCTT CATGGCGTGC AGTTCGACAT ACCGCCGGTT
GTACGATTCC CGGGCCAACC TGGGGAGCAG CGAACGATGT TTTTCCTGGA CCCCAGTGGC
AACCCGATCG AGATCAAAGG GTTCAAGGAC TTTGAAGGTG TATTTGCCAC CTGA
 
Protein sequence
MKSLFHVSYH VTDLEASRNF YGNILGCKEG RTSETYVDYD FFGHQISLHK GVPFPTTRTG 
KVGDHEVLMP HIGLVLHLDD WFAMADRLAL HGVQFDIPPV VRFPGQPGEQ RTMFFLDPSG
NPIEIKGFKD FEGVFAT