Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3328 |
Symbol | |
ID | 1046973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3765152 |
End bp | 3765565 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637146748 |
Product | ring-cleaving dioxygenase, putative |
Protein accession | NP_745470 |
Protein GI | 26990045 |
COG category | [R] General function prediction only |
COG ID | [COG3565] Predicted dioxygenase of extradiol dioxygenase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.300318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.894596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCGT TATTTCATGT TTCATACCAT GTTACAGATC TCGAAGCATC TCGTAACTTC TACGGTAACA TTCTCGGCTG CAAAGAAGGC CGCACGAGTG AAACTTATGT GGATTACGAT TTCTTCGGTC ACCAGATTTC GCTTCACAAA GGTGTTCCTT TTCCAACTAC CCGTACTGGT AAAGTCGGCG ACCATGAAGT GTTGATGCCG CATATCGGCT TGGTGCTGCA TCTGGATGAC TGGTTCGCGA TGGCAGACCG CCTGGCGCTT CATGGCGTGC AGTTCGACAT ACCGCCGGTT GTACGATTCC CGGGCCAACC TGGGGAGCAG CGAACGATGT TTTTCCTGGA CCCCAGTGGC AACCCGATCG AGATCAAAGG GTTCAAGGAC TTTGAAGGTG TATTTGCCAC CTGA
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Protein sequence | MKSLFHVSYH VTDLEASRNF YGNILGCKEG RTSETYVDYD FFGHQISLHK GVPFPTTRTG KVGDHEVLMP HIGLVLHLDD WFAMADRLAL HGVQFDIPPV VRFPGQPGEQ RTMFFLDPSG NPIEIKGFKD FEGVFAT
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