Gene PP_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3300 
Symbol 
ID1046950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand+ 
Start bp3733309 
End bp3733923 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content55% 
IMG OID637146721 
ProductTetR family transcriptional regulator 
Protein accessionNP_745443 
Protein GI26990018 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.161696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAT CTTCTCCACC CTCGCCGGCG CGCGGGCCAG CCGACCACGA CGTGAGGGAT 
CAGATCATCC AGGCTGCCAT GGAGCACTTC GCCCATTATG GGTACGACAA GACCACTGTT 
TCTGACTTAG CCAAATCGAT TGGCTTTTCA AAGGCCTACA TCTACAAATT CTTCGAATCC 
AAACAAGCGA TCGGAGAGGT GATTTGCTCC AGTCGGCTTG CGCTGATCAT GCAGCGCATT 
GCGACGGCCA CCAGCGACGC CCCGACTGCA TCGGAAAAGC TGAGACGTCT ATTCCGAGCG 
ATCGCTGAGG GCGGAGCTGA CCTTTTCTTC CACGACCGGA AGCTCTATGA CATAGCGGCA 
GTGGCATCTC GCGACCAATG GTCGTCGGTC AAGTCTCATG AGGCCAATAT CAGTAAGGTC 
ATTCTGGAGA TCCTGACACA AGGCCGCGAC GCAGGAGAAT TTGAACGCAA GACACCCCTG 
GACGAACTGA CACTGGCGAT TTTTCTGATC ATGAGGCCAT ACGTAAATGC CGCGCTTCTT 
CAGCACAACC TGGACACGCT TCAGGATGCG GTCGTCCAAC TGCCGGCTTT GATACTCAGA 
AGTCTCGCCC CTTAG
 
Protein sequence
MSKSSPPSPA RGPADHDVRD QIIQAAMEHF AHYGYDKTTV SDLAKSIGFS KAYIYKFFES 
KQAIGEVICS SRLALIMQRI ATATSDAPTA SEKLRRLFRA IAEGGADLFF HDRKLYDIAA 
VASRDQWSSV KSHEANISKV ILEILTQGRD AGEFERKTPL DELTLAIFLI MRPYVNAALL 
QHNLDTLQDA VVQLPALILR SLAP