Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3290 |
Symbol | |
ID | 1046937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3724428 |
End bp | 3725354 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637146711 |
Product | universal stress protein |
Protein accession | NP_745433 |
Protein GI | 26990008 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.918618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCAAT ATCGACAATT GCTGGTGCTG CTGACCGAGG TCGATCCGCA TTCCGCCGCT TTGCGCCGAG CCCTTGCCTT GGCGCAAGTC AGCGGCGCCA GCGTGCATGT GCTGGGCTTG TTCGAGCCAA GCGAGGAGCA CCTTCTGCGC GAAGAGCGGC TGAACGAGGC CGATATCAAG CGCCAGTACC AGCATTATCG CGCTCAGTTG ACGGGACTGG TCGAGCGGCA TCGCGGCAGC GGTACAACGC TGACAGTCGA CAGCCTGAAT GCGGAGGATA TCCGCAGCCA GGCGATCGAT TACATCAGCG AACAGCAGCC CGATATGGTC ATCAAGGACA GCGAAGCTGC GTCGGCCCTG GTGCGCATGT TCGGCACCCC ACTGGATTGT GCGCTGATGC GAGGTTTCAA AGGCGTCAGC CATTTCGTGC CGGCGGCGGC CGTTTCATTG CCGCGGCGTG TGCTGGTCGC CGTGGATACT GCGTTCAGCG AGACGCCTGC CGTCCAGGCG TGCTTCAATC GTGGACTGAT TCGTGCTGGC CAGGCGCTGG CGTTACAGTG TGACGCGCAC CTGCATCTGC TATCGGCCTA CAACCTGGCA GGGGTATTTG CCTCGGACAT GAATGTCTCC CAGGCCTGGA TCGACGAGAT GCGCGAGGCA CTGCAGGAGC CATTCGAAGC GCTGGCCGAT GCCGAAGGCG TCGCGCCGGA CCGCCGACAT TTCATGGAAG GAGGCCCGGT ACAGGTGATC CGGGAACAGG TCGCGTCCCT GGACATCGAC GCGGTGGTGA TGGGCGTGGT GCAGCCCAAA GGCCTGGACA AACTATTGGG AGACACCACC GAGCGTATCG TCAGCCGCCC ACCGTGCAGC GTGCTCGCCG TTCATCCCCA AATAGCCGAA AGTTGGGAGC CTTGGCCATG CAACTGA
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Protein sequence | MGQYRQLLVL LTEVDPHSAA LRRALALAQV SGASVHVLGL FEPSEEHLLR EERLNEADIK RQYQHYRAQL TGLVERHRGS GTTLTVDSLN AEDIRSQAID YISEQQPDMV IKDSEAASAL VRMFGTPLDC ALMRGFKGVS HFVPAAAVSL PRRVLVAVDT AFSETPAVQA CFNRGLIRAG QALALQCDAH LHLLSAYNLA GVFASDMNVS QAWIDEMREA LQEPFEALAD AEGVAPDRRH FMEGGPVQVI REQVASLDID AVVMGVVQPK GLDKLLGDTT ERIVSRPPCS VLAVHPQIAE SWEPWPCN
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