Gene PP_3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3214 
Symbol 
ID1046863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3647714 
End bp3648520 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content56% 
IMG OID637146636 
Producthypothetical protein 
Protein accessionNP_745358 
Protein GI26989933 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3248] Nucleoside-binding outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGA ACGCTCTTTC CTGGCTGCTT CACAGCGTCG TCCCACTCTG CGCGTTGGCC 
ACCGGCAGTG CCCAGGCGAA TCCGCTGATG TGGAGCAACA ACAGCCTCAG CTACCTCTAC
GGGCATGGTT ATAAAGTCGA TGGCACCGGC AACGATATCC AGCAAACCAT CACCTTCGAG
CACGCCAGTG GCTGGACGTG GGGCGACATG TTCCTGTTCG TCGATAACAA GTGGTCCAAC
GGCTTGTCCG GCAACGATGG CTACACCTAT TACGGCGAGT TTTCACCGCG ACTGTCGCTC
GGCAAGATCA GTGGCCACCG TCTCAGCTAT GGCATCGTCA AGGATGTGTT GATCGCTGCC
ACCTATGAGC GTGGAGAAGG GCGCAATCGA AAGTACCTGC TTGGGCCCGC TGTTGACCTG
AACCTGCCTG GATTTGATCG TTTTTCACTG AACACTTACT ACCGCAAGCC CGATGGGATC
ACCGGTAAAG CGTCTGGACA GTGGCAGATC AACCCGACCT GGGCCATGAC GATACCGCTC
GGGCGCTCCG ACATTTTGCT CGACGGTTAT CTGGAGTGGT ACGTCAATGA TGTGGGGACG
AAGGGTACCT CGAACTATGT AGCCAAGAGT TTCCACTTCA ACCCCCAGAT CAAGTACGAC
GTCGGTAAGG CGATGGGGCA AGCGCCGGCG CGTTTCTATG CCGGGATCGA GTGGGACTAT
TGGTCCGACA AATATGGCAT CGAAGACAGC CACGGCTTTC CGACCGATCA GAACGCGTTG
AGTGCATTGA TCAAGGTGCA TTTCTAA
 
Protein sequence
MKPNALSWLL HSVVPLCALA TGSAQANPLM WSNNSLSYLY GHGYKVDGTG NDIQQTITFE 
HASGWTWGDM FLFVDNKWSN GLSGNDGYTY YGEFSPRLSL GKISGHRLSY GIVKDVLIAA
TYERGEGRNR KYLLGPAVDL NLPGFDRFSL NTYYRKPDGI TGKASGQWQI NPTWAMTIPL
GRSDILLDGY LEWYVNDVGT KGTSNYVAKS FHFNPQIKYD VGKAMGQAPA RFYAGIEWDY
WSDKYGIEDS HGFPTDQNAL SALIKVHF