Gene PP_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3212 
Symbol 
ID1046860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3644968 
End bp3645993 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content60% 
IMG OID637146634 
ProductRieske 2Fe-2S family protein 
Protein accessionNP_745356 
Protein GI26989931 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGTTA CCAAACAACC TGTATTGCGC CGTTTCTGGT ATGCCCTGCT CCCTATGACA 
GCCCTCGAAG ACGGCCCCAA GCCATTCACC CTGCTGGGTG AAGCGCTGGT GTTGTGGAAG
CGTCCCGATG GTACCCCGGT GGCAATGCGG GACCGCTGCT GCCACCGCAC CGCCAAACTG
TCCAAAGGCT TCGTCAGTGC TGAGGGCAAT ATCGCCTGCG GGTATCACGG CTGGGAATAC
GACTGCACCG GCACGTGCGT GAAGATCCCG CAGAGTCCCA CCGGCGCTAT TCCTCCGGGG
GCCGCGGTGA AGGCTTATCA CTGCCAGGAA AAGTACGGCT ATGCCTGGGT CAGCCTGGAC
GACCCGCTAC AACCGATCCC TGAGTTCCCG GAAGACGGCG CCCCCGGTTA CCGACGCATC
TTCCAGTTTT ACGAAGAGTG GAAGACCAGC CCGCTGCGGG TCATGGAGAA CTCCTTCGAC
AACTCGCACT TTTCCTTCGT GCACAAGGCC AATTTCGGCT TGTTCGACCA GCCGCAACCG
GCCAGTTACG AGTTTCGCGA AACCGATTAT GGCTTCGAAG CCGAGACCCG CGTGCCGATC
CGCAACCCCG AGGCAAGCTT CCGTATCACC GGTACGACCG AGCCGATTAC CCAGCGGCAC
CTGCTCAACC GCTACTACCT GCCCTTCTCC CGGCGCTTTG GCTGCATGTA TCCGGACAGC
GGCATCCATC ACATCATCTA CAACTGCGCC ACGCCCATCG ACGACAACCG ACTGATGCTC
GTGCAGTGGT TGTATCGCAA CGACAGCGAA GAGCAATGCT CGACCCAGGA ACTGATCGAC
TGGGACGCAG CGATCACAGC CGAAGACCGC GACATCCTGG AGGCTACCGA TCCTGACGCC
TGTGTCGACA CCCGCCGCAG GGTGGAACTG CACATGCCAT CGGACAAGCC CGGGTTGGTT
ATCCGTCGGC AACTACTGGG TCTGCTTGAA GCCCATGGCG AGAGCGAAGT GTTCCTCAGC
CACTGA
 
Protein sequence
MLVTKQPVLR RFWYALLPMT ALEDGPKPFT LLGEALVLWK RPDGTPVAMR DRCCHRTAKL 
SKGFVSAEGN IACGYHGWEY DCTGTCVKIP QSPTGAIPPG AAVKAYHCQE KYGYAWVSLD
DPLQPIPEFP EDGAPGYRRI FQFYEEWKTS PLRVMENSFD NSHFSFVHKA NFGLFDQPQP
ASYEFRETDY GFEAETRVPI RNPEASFRIT GTTEPITQRH LLNRYYLPFS RRFGCMYPDS
GIHHIIYNCA TPIDDNRLML VQWLYRNDSE EQCSTQELID WDAAITAEDR DILEATDPDA
CVDTRRRVEL HMPSDKPGLV IRRQLLGLLE AHGESEVFLS H