| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3133 |
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| Symbol | |
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| ID | 1046780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3548666 |
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| End bp | 3550132 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637146555 |
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| Product | GMC oxidoreductase |
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| Protein accession | NP_745277 |
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| Protein GI | 26989852 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.275059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGG ACTTTGAGCA GCAGAAGGCG CTGCGCGATC ACTATGATTT CTGCATCATC
GGGGCCGGCC CGGCGGGTAT AACCCTGGGC TTGCGCCTGG CAGCCGCCGG CTGGAGCGTA
ATGATCGCCG AAGGCGGGGG GCGCGAATAT GCGCCGCACT CGCAAGACTT GTACGCGTGC
TCATCCACCG GCCTGGAACT GTATGCCGAG GAAACCCGCC TGCGCTACCT GGGTGGCACC
TCCAATCACT GGGCTGGCCG GTGCCGACCA TTCACCCCTT CGGATTTTGC CGTCGCCCCG
CCAGGCGTCT TGCCGGGCTG GCCAATTCCC TACTCGGAGA TCGAAGGCTT TCTGCCGGCA
GCCATGGAGA TCGTCGATCT GGCGCCTGGC TCGGATTTTC GCGCGATGAA TGCCGGTCTC
AATGGCGGTG ACTTCGAGGC GGACCGTTTT CTGCTCAGCA CGCCGACACG TTTTGCGCAG
AAGTACGCTA CAGCACTGGA GCAGACCCCA GGCCTGGATG TGTTCATCAA CTGTAATTGC
GTTGACCTGG AGTTCGACAA GGCTTCCGGC CACCTGGCTG CGGTGGTTTT GTCTGACTAT
GAGTGCAATC GTCAACGCCT GGTGGCTGGA AATTTCATTC TGGCCACAGG GGCCATCGAG
AATGCCCGGC AGTTGCTGAA CAGCGAGACC CTGGTGGCCG CAGGCGTGGT GAGCAAGGAA
GGGCTGGTCG GCGGGTGTTT CATGGAACAC CTGAATATCG AAATGGGCAC TTTCATCCTC
AAGTCCGGGC AGGACCCAGA GCCGCGCCAG TACTACACCA CCGATGCTTT CGTCGACGAG
TACAAGGCCG GTAAAGGCAA TGTCACCGCC TCCTTGCTGG CCGATGTGCA AACTTATGGC
CGCACTGCCG AGGTGAAGTA TTTTCTCGAG AGCCTGGCCT GCGACATGGG GTTTGCCAGC
AAGGTCGCCT TCGTCGCCAA GTTCAGCTGC CCTGGTGACG GCGTGATCAG CACCATGATC
GAGCAGTTCC CCAACCTGCA CAGCCGCATT TCGCTGCTGG ACAAGAAGGA TGCGCTGGGC
GTGGCCAAGG TCAATGTCAA TTGGGTGCTT AGCGCCGAAG ACCGGCACAC CATCAAGTGC
ATTGGCAGCG AACTGGCCAA GCAGTTCGCC GACATGGACC TGGGGTTCGT CAAGCTCAAC
GATTTCGTTT ACGACACCTC GATACCGCTG AGAATGGCAC CCCATGCCCA TCACATGGGC
ACCACGCGCA TGGCCGCCTC GCCGCAGTTC GGTGTGGTCG ATGCCAATTG CAAGGTGTTC
GGTACCGAAA ACCTGTATGT CGCCGGCAGC AGCATTTTTG CCAAGGGCGG CGCCTCCAAC
CCGACCATGC CGCTGTTGCA ATTTGCCTTG CGGCTGGCCG ACCACCTCGA TAACAAGATG
AAAGCGGCCA GCGGCGCCGC GGCGTGA
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| Protein sequence | MIKDFEQQKA LRDHYDFCII GAGPAGITLG LRLAAAGWSV MIAEGGGREY APHSQDLYAC
SSTGLELYAE ETRLRYLGGT SNHWAGRCRP FTPSDFAVAP PGVLPGWPIP YSEIEGFLPA
AMEIVDLAPG SDFRAMNAGL NGGDFEADRF LLSTPTRFAQ KYATALEQTP GLDVFINCNC
VDLEFDKASG HLAAVVLSDY ECNRQRLVAG NFILATGAIE NARQLLNSET LVAAGVVSKE
GLVGGCFMEH LNIEMGTFIL KSGQDPEPRQ YYTTDAFVDE YKAGKGNVTA SLLADVQTYG
RTAEVKYFLE SLACDMGFAS KVAFVAKFSC PGDGVISTMI EQFPNLHSRI SLLDKKDALG
VAKVNVNWVL SAEDRHTIKC IGSELAKQFA DMDLGFVKLN DFVYDTSIPL RMAPHAHHMG
TTRMAASPQF GVVDANCKVF GTENLYVAGS SIFAKGGASN PTMPLLQFAL RLADHLDNKM
KAASGAAA
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