Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3123 |
Symbol | |
ID | 1046771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3534054 |
End bp | 3534710 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637146545 |
Product | 3-oxoacid CoA-transferase subunit B |
Protein accession | NP_745267 |
Protein GI | 26989842 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.818708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGA CCCGCGAACA GATGGCGCAA CGCGTTGCCC GTGAACTGAA GGACGGCTAC TACGTCAATC TGGGCATCGG CATCCCCACC TTGGTGGCCA ACTATGTACC CGCCGACATG GATGTGATGC TGCAATCGGA AAACGGCTTG CTCGGCATGG GCGAATTCCC CACCGAAAGC ACCCTCGATG CCGACATGAT CAACGCCGGC AAGCAAACTG TCACCGCCCG CCGCGGCGCC TCGATTTTCG ATTCGGCACA ATCGTTCGCC ATGATCCGTG GCGGCCACGT CGACCTGACC GTACTGGGTG CTTTCGAGGT GGACGTGCAG GGCAACATCG CCTCGTGGAT GATTCCGGGC AAGCTGGTCA AGGGCATGGG CGGGGCCATG GACCTGGTGG CCGGTGCCGA CAACATCATC GTCACCATGA CCCACGCCTC CAAGGACGGC GAGTCCAAGT TGCTGCCAAA GTGCAGCCTG CCGCTGACCG GTGCGGGCTG CATCCGCAAG GTGCTGACCG ACCTGGCCTA CCTGGAAATC GAAGACGGCG CCTTCATTCT GCGCGAGACC GCGCCTGGGG TCAGCGTCGA GGAAATCATC GAGAAAACCG CCGGCAAACT GATCGTGCCG GATGATGTGA AGGAAATGAC CTTCTAA
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Protein sequence | MALTREQMAQ RVARELKDGY YVNLGIGIPT LVANYVPADM DVMLQSENGL LGMGEFPTES TLDADMINAG KQTVTARRGA SIFDSAQSFA MIRGGHVDLT VLGAFEVDVQ GNIASWMIPG KLVKGMGGAM DLVAGADNII VTMTHASKDG ESKLLPKCSL PLTGAGCIRK VLTDLAYLEI EDGAFILRET APGVSVEEII EKTAGKLIVP DDVKEMTF
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