Gene PP_3050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3050 
Symbol 
ID1043388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3433319 
End bp3433849 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content63% 
IMG OID637146472 
Producthypothetical protein 
Protein accessionNP_745194 
Protein GI26989769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.433351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGG ATTTCATTCC ACTAGGCCAG GTGTATGCGG CCATGGAGCA GCACATCAGG 
GAAGCCATTC CAGGCTTGCA GTATGTCGGG ACCATGCCGA GCGGCATCGA GGTCGTCCCA
CCGCCTGCAG TGGTGCTCGA ACTGGCAGGA TTCGAAAGTG CCGAAGAAGA CCCAGGCACG
GGGCAGACGG CGGTCGATGC GCGTTTTGAA GCGCGCGTGC TGGTACCGGG GGAGGAAGAT
AACTGCTTGC ACATAGCTGC ATTTGTCGCC GCTCAGTTGG CTGTGCTGCT CCGCATGCAG
TCGTGGGGCC TGCCGGTGAG GTTCGCTGAG TTCGTACGCG CCGAGCGCGA TTGGAGCAGG
CCAGAGCTGG ACGGCTTTGC GGTCTGGGTG GTCGAGTGGA CTCAGATCAT CTACTTGGGC
GAGGAGGAGT GGCCGTGGCC CCGAGAGCCC GGCCCGGTGC TGTTCGCCTT CGACCCGGAC
AGCGGGGAGG GGAAAGAGCA GCACTATCAA CATCCGGGGG CCATGGAATG A
 
Protein sequence
MDEDFIPLGQ VYAAMEQHIR EAIPGLQYVG TMPSGIEVVP PPAVVLELAG FESAEEDPGT 
GQTAVDARFE ARVLVPGEED NCLHIAAFVA AQLAVLLRMQ SWGLPVRFAE FVRAERDWSR
PELDGFAVWV VEWTQIIYLG EEEWPWPREP GPVLFAFDPD SGEGKEQHYQ HPGAME