Gene PP_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3023 
Symbol 
ID1043158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3409505 
End bp3409939 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content64% 
IMG OID637146445 
Productamino acid efflux protein, putative 
Protein accessionNP_745167 
Protein GI26989742 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0879148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGCAG GGCCCGGAAC CCACCGAAAT AGAGGGCTGT TGTCAGAGGA AACGAGAATG 
GACCTTTCAA GCCTGCTGCT TTTCATCCCT GCCTGCTTCG CCTTGAACAT GGCGCCAGGG
CCTAACAACC TGTTGTCACT GCACAACGCC AGCCGTTACG GCCTGCGCAC CGCCTGCGTG
GCCGGCGCCG GCCGTATCCT TGCCTTCTGC GGCATGATCG CCCTGGCAGC GATGGGCCTG
GCAGTGGTGT TGCATACCAG CGAATACCTA TTCCTGGCCA TCAAGGTGGT GGGCGCGGCC
TACCTGTTCT ACATCGCCTG GCAACTGTGG CGCGCACCCG TGAGCGAGAC CGTGGTGGCA
AGCGATCACC CAGGCGGCAC TTGGCGCCTG GCGCGCCAGG AGTTCTGGGT GGCGGCCGGC
AACCCTAGCG ACTGA
 
Protein sequence
MTAGPGTHRN RGLLSEETRM DLSSLLLFIP ACFALNMAPG PNNLLSLHNA SRYGLRTACV 
AGAGRILAFC GMIALAAMGL AVVLHTSEYL FLAIKVVGAA YLFYIAWQLW RAPVSETVVA
SDHPGGTWRL ARQEFWVAAG NPSD