Gene PP_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2978 
Symbol 
ID1043000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3377949 
End bp3378350 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content54% 
IMG OID637146400 
Producthypothetical protein 
Protein accessionNP_745122 
Protein GI26989697 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.148956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0419539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATCA AGCTGGATAC CGGCGCACTG ACATCGTCTA TGGATGCCAA AGATTTGGAG 
CGTTTCGAAA GGAATGGCGA GAAATGGGTG CGTTTCAAAG TTGAAGTGAA AGACAGTGAC
ACAGGCAGAG CAGCCAGCAT CCCTTTCGAG CGAAGGGTCG AGCGTAACGT CAAAGTCCGT
GGTGCTGGCG GCGCTGAGCA CCGCCCCGTG GTAGTGATGA AGATGTGCAT TGGCAACCAG
CTTTTACAAC GAACAATTCT CCCTGAAGAA CCGGGAAAAA ATGCTCCATC CGGTTTTGAT
CGGCCGTCGA GCACTGGAGC ACCTAGGAGC GGTGGATGTA TCACGCACCT TCACTCAGGA
GCCCAAGTGC GAGAAAGCCG ACCCGGCGCA GAGCGGGTAT AG
 
Protein sequence
MKIKLDTGAL TSSMDAKDLE RFERNGEKWV RFKVEVKDSD TGRAASIPFE RRVERNVKVR 
GAGGAEHRPV VVMKMCIGNQ LLQRTILPEE PGKNAPSGFD RPSSTGAPRS GGCITHLHSG
AQVRESRPGA ERV