| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2968 |
|---|
| Symbol | |
|---|
| ID | 1042984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 3370638 |
|---|
| End bp | 3371771 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637146390 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_745112 |
|---|
| Protein GI | 26989687 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.169755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGCT TCGCTGAACT GCTGCAACAG GGAGCCTCGC AGGCCTGGTT GTACTTCCCC
AGTGCCATCC TGCTGGGAGC CTTGCATGGC CTAGAGCCAG GGCATTCGAA AACCATGATG
GCGGCGTTTA TCGTGGCCAT TCGCGGCACG GTGAAGCAGG CTGTTCTGCT GGGACTGGCC
TCAACGCTTT CCCACACCGC AGTGGTTTGG CTGGTGGCCA TGGCCGGCAT GTACCTGGGG
CAGAACCTGA ATGCCGAAAC CACCGAGCCG TATTTCCAGC TTGCGTCCGC CGCCATAATT
ATCACCATCG CCCTGTGGAT GCTTTGGCGC ACCTGGCGTG GCGAGCAGAT GTGGCGCTTC
GAGGAAGGCG ATGATCTTCA GCATGACTAT CACCACCACG ATGAAATGCA GCGCATCGAC
ACCGGGCATG GGCGCATCGA ACTGTCGATC TTCGAAGAGG GCGTCCCTCC GCGCTGGCGA
CTGAATATCT TGACTGGCCA TGCCTGGTCG GCAGCTGAAA TGAGCCTGCT GACGACCCGC
CCCGATGGCC TGGCCCAGCA GTTTCGCTTC GTCGACCGAG GTGACTACCT GGAGTCAGTG
GACGAGATTC CCGAACCCCA CGAATTCACA GCGCGCCTGA GCCTCGGCCA TGCCGGTCAT
TCTCACGACT ATGATCTGGA GTTCCACGAG CACGGCCACG GTCATGGCCA TGATCATGCA
GAACTGGAGG GCCTGGAGCT GTCGTTGGAG GGCTACCAGG ATGCCCATGA GCGGGCGCAT
GCCAACGATA TCCGCAAGCG CTTTAGCAAT CGCAACGTCA CCACGGGCCA GATCATCCTG
TTCGGTTTGA CGGGCGGGCT GATTCCTTGC CCGGCAGCGA TCACCGTGCT GCTGCTCTGC
CTACAAGTGA AGGAAGTCGC GCTGGGAGCC GTGCTGGTGT TGTGCTTCAG CATTGGCCTG
GCCATCACCC TGGTTACCGT TGGTGCTGCC GCCGCTATCG GAGCACGCCA GGCGTCCAAT
CGCTGGCCCT GGCTTGGTGC TGTGGCGCGT CGCGCTCCGT ACCTGTCCAG CCTATTGATC
ATCGGTGTGG GGATTTACGT GGGTGTCCAT GGCTGGATCG GCCTGAACGC CTAG
|
|---|
| Protein sequence | MSSFAELLQQ GASQAWLYFP SAILLGALHG LEPGHSKTMM AAFIVAIRGT VKQAVLLGLA
STLSHTAVVW LVAMAGMYLG QNLNAETTEP YFQLASAAII ITIALWMLWR TWRGEQMWRF
EEGDDLQHDY HHHDEMQRID TGHGRIELSI FEEGVPPRWR LNILTGHAWS AAEMSLLTTR
PDGLAQQFRF VDRGDYLESV DEIPEPHEFT ARLSLGHAGH SHDYDLEFHE HGHGHGHDHA
ELEGLELSLE GYQDAHERAH ANDIRKRFSN RNVTTGQIIL FGLTGGLIPC PAAITVLLLC
LQVKEVALGA VLVLCFSIGL AITLVTVGAA AAIGARQASN RWPWLGAVAR RAPYLSSLLI
IGVGIYVGVH GWIGLNA
|
|---|
| |