Gene PP_2927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2927 
Symbol 
ID1042902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3328447 
End bp3329493 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content65% 
IMG OID637146349 
Producthypothetical protein 
Protein accessionNP_745071 
Protein GI26989646 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0580788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGG CAAGGCTTCA CGATTTCATG GGCAAGCTGG TGGGCGACAT GGGCGCAGCG 
GCGACGCTGG CCAATGTCAT TCTCGGCGAT GAACTGGGGC TGTACCGGGC CATGGCCGAC
AGCCAGGCGG TCACCCCTGA GCAACTGGCG GAAAAGACCG GCTGCCACCC GCGGCTGGTG
CGAGAATGGT TGAATGCCCA GGCGGCATCG GGCTACATGG TCCATGACAA GGGCCGTTTT
GTGCTGCCTG AAGAACAGGC CATGGCCCTG GCGCTGGAGG ACTCCCCGGC CTACATGGCC
GGCGGCGCGG CAGTGGTGGC GGCGCTGTTC CATGACAAGG ACAAGCTGGT AGCCGCCATG
CGCGGCGATG GCGGGTTGGC CTGGGGCGAT CACCACCCGT GCATGTTCAG CGGTACCGAG
CGCTTTTTCC GGCCGGGGTA TCGCACCTTC CTGGTTGCGG ATTGGCTGCC GGCACTGGAG
GGTGTGGTGG CCAAGCTGCA GGCGGGCGCC AAGGTGGCGG ACGTGGGCTG CGGTCATGGT
GCCTCGACGC TGGTGATGGC GCAGGCGTTT CCGGCGTCGA CCTTCGTGGG GTACGACTAT
CATCAGCCTT CAATCGTCAC CGCCAACGCG CGTGCACGGG AAGCGGGGTT GGAGGGGCGG
GTGAGCTTCC AGCAGGCCAG CGCCAAGGAG TACCCGGGGC ATGATCATGA CCTGGTGTGC
TTCTTCGATT GCCTGCACGA CATGGGTGAC CCGGTCGGGG CAGCCAGGCA TGCCTACCAT
GCTTTGAAAG CTGATGGCAC GGTCATGCTG GTGGAGCCAT ATGCCGAGGA CTCGCTGGAG
GGTAACCTGA CACCGGTCGG GCGCTTGTTC TATGCGGCGT CGACGTTTAT CTGCACGCCC
AATTCGTTGT CGCAGGAAGT GGGACTGGGG TTGGGTGCGC AGGCCGGGGA GGCGCGATTG
CGGGCCGTCT TCGAGGAGGC GGGGTTCAGC CGCTTCCGGC GCGCGACGCA GACGCCGTTC
AACCTGATTC TGGAGGCCCG CAAGTAG
 
Protein sequence
MDEARLHDFM GKLVGDMGAA ATLANVILGD ELGLYRAMAD SQAVTPEQLA EKTGCHPRLV 
REWLNAQAAS GYMVHDKGRF VLPEEQAMAL ALEDSPAYMA GGAAVVAALF HDKDKLVAAM
RGDGGLAWGD HHPCMFSGTE RFFRPGYRTF LVADWLPALE GVVAKLQAGA KVADVGCGHG
ASTLVMAQAF PASTFVGYDY HQPSIVTANA RAREAGLEGR VSFQQASAKE YPGHDHDLVC
FFDCLHDMGD PVGAARHAYH ALKADGTVML VEPYAEDSLE GNLTPVGRLF YAASTFICTP
NSLSQEVGLG LGAQAGEARL RAVFEEAGFS RFRRATQTPF NLILEARK