| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2852 |
|---|
| Symbol | |
|---|
| ID | 1042762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 3253533 |
|---|
| End bp | 3255734 |
|---|
| Gene Length | 2202 bp |
|---|
| Protein Length | 733 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637146274 |
|---|
| Product | sulfatase domain-containing protein |
|---|
| Protein accession | NP_744996 |
|---|
| Protein GI | 26989571 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAACC TGTCCGACCA CCCAAGCACC CGGCTTGCCA CTTTGGCGGC TCTGGTGCTG
GTGATCCCAC TGGGTACGCG CGCCATGCTG GGTTGGTCCA ACCCGTTCGG TTACCTGTCC
GATCTCGCCC TCGGCAGCCT GTTGATAGTG CTGCTACACC GCAGGCCGTG GTGGCTGGCG
CTGCCCGTGC TGCTGGCCTG GGCGGCGCTG TGGGTGGCCT CGGCCGAACT GGTAAGCGCA
GTGGGCCGAC TGCCCACCAG CGCCGACCTT AACTACCTGA CCGACCCGCA ATTCATGGAG
AATTCGACCG GTGGCGGCCT GGCCCATGCC TGGCTGCCCT GGGCCCTGGG TGGCGGCCTG
CTGGCCTGGC TGGCCTTTGC GTGGCGCAGC CGTGCTCGGC GTAGCCAGCC ACTGCCGCGC
AAAGCCTGGG CCATACCCGT ACTGCTGTTC GGCGCGCATT GGGGCAGCCA GCAGTTGCTA
CCTTCCGATG CCGACCAGTG GCGGCAATAC AACCTCCCCC ACCAGTTGAT GTCTGCCGGG
GTCGGTAACC TGCAACGCCA GGTCGAAGGC TGGATGGGCC ACACGCAAAC CTTCACCCCG
CTGGCCAGCA GCGGCCTGAC TCAATCCGAC CTGCATGGGC AAAGGCTGCT TGCCGGCCCG
GGAAGCGCCC GCAACTTGCT GGTGATTACC CTGGAAGGCA TCCCGGGCGC CTACCTGCGG
CCTAACCGCC AGGCGCTGAA CAGCCATTTC AACGAAGACT TGATGCCCAA GCTCAGCAAA
TGGGCCGAGC GCGGCATGAA CACCCCAGAC TACGTGCTGC ACACCCACCA GACCATCCGT
GGCCTGTATG CGATGCTGTG CGGCGATTAC GACAAGCTGG CCAACGGCAC GCCCAAGGGC
GTGGAACTGC TGACCCAGAA CCAACGCAAC CAGGCCTGTC TGCCGGCACA ATTACGCCAG
GCCGGTTTCA CCACCCACTA CCTGCAAGGC GCAGGCCTGC GCTTCATGGC CAAGGACCGC
ATCATGCCGC ACATCGGTTT CGATGCGGTG CATGGCCAGG AGTGGTTCAG CAACAAGAAC
TACCTGCACT TCCCATGGGG CAAGGATGAC CGCGCTTTCT TCGAAGGCGC CCTGGGCTAT
GTGGGCCAGT TGCAGAAGCA GGACAAGCCA TGGATGCTGA CGCTGCTCAC CGTGGGCACC
CACCAGCCCT ATTCGGCGCC GGCCGAGTAC CTCGAGCGCT TCGACACACC GAAACAGGCA
GCCGTCGCCT ACCTGGATGA CGCAGTCGGG GCATTTCTTG ACAATCTCGA GCGCCAGGGC
GTCCTCAAGG ACACACTGGT GGTGGTGACT TCCGACGAGT CTCACGGCAT CGATGGCGTG
CGCCTGGCCT CGTCCTGGGG CTTCAACCTT ACATTGGCGC CGGAGCAGGC CCAACTGCCA
ACCATCAAGC GCGGCACTTA CGGCCATATC GACCTGGCCA CCTCGCTGCT CGACTACTTC
GCACTGCCCA TTCCCGTCGC GCTTGGCGGT CGCTCGCTGT ACCGCGACTA CGACAGCGGC
CGCGAGATGA TCTCCTACAC CAACGGCATG CTGCGCTACC ACAACGGCCA GGGCCTGTTC
ACCGAATGTG ACTTCCAACA GCGCTGCCGG CGTTATGCCA GTGAGGGCTT CATCGCCGAC
CAGGCCCGCT ACCTTGGGCC GGCCGACAGC CTGCTGGGCC AACAGATCGG TGCCTTGGCC
GTGGTACTCG ACCAATCCTT GCTGCAAACC CCGCTCAACC TGCGCTACCA GTTCGGCGGC
CCTTCGCCGA TCAAGTTGCG CAAGCGCATT GACGATGACT GGGCCGACAA CCTCATTGGC
GCCCAGTATC TGGAAATGCC CGGAGGCTCG CACACCCGCG TGCGGGTCAA GGTCCGCTCG
CTGGACCCCA AACGTGCGGC CTACATCCGG CTCAAGGCCA AGCAGTTGGA ACAGGACGTG
CCGCTGGGCC TGCCAGAAGA GGTAAAGGTC ACCACCGACG CGCCACTGGA GATGGAGTTC
AGCTTCGACA ACCCGACCGA GCGCAAGGCG TTTTCCTTCC ACTTGCTGGG CTATGGCGGC
GGCAAGGTAG AAGTCAGCGA CTTTAGCGTG ATCACCGCCC TGCCTGGTGA GGATGACGGC
GCCGATGAAC GGGCCGAGGG GCATATCGCC CAATCGGGCT GA
|
|---|
| Protein sequence | MKNLSDHPST RLATLAALVL VIPLGTRAML GWSNPFGYLS DLALGSLLIV LLHRRPWWLA
LPVLLAWAAL WVASAELVSA VGRLPTSADL NYLTDPQFME NSTGGGLAHA WLPWALGGGL
LAWLAFAWRS RARRSQPLPR KAWAIPVLLF GAHWGSQQLL PSDADQWRQY NLPHQLMSAG
VGNLQRQVEG WMGHTQTFTP LASSGLTQSD LHGQRLLAGP GSARNLLVIT LEGIPGAYLR
PNRQALNSHF NEDLMPKLSK WAERGMNTPD YVLHTHQTIR GLYAMLCGDY DKLANGTPKG
VELLTQNQRN QACLPAQLRQ AGFTTHYLQG AGLRFMAKDR IMPHIGFDAV HGQEWFSNKN
YLHFPWGKDD RAFFEGALGY VGQLQKQDKP WMLTLLTVGT HQPYSAPAEY LERFDTPKQA
AVAYLDDAVG AFLDNLERQG VLKDTLVVVT SDESHGIDGV RLASSWGFNL TLAPEQAQLP
TIKRGTYGHI DLATSLLDYF ALPIPVALGG RSLYRDYDSG REMISYTNGM LRYHNGQGLF
TECDFQQRCR RYASEGFIAD QARYLGPADS LLGQQIGALA VVLDQSLLQT PLNLRYQFGG
PSPIKLRKRI DDDWADNLIG AQYLEMPGGS HTRVRVKVRS LDPKRAAYIR LKAKQLEQDV
PLGLPEEVKV TTDAPLEMEF SFDNPTERKA FSFHLLGYGG GKVEVSDFSV ITALPGEDDG
ADERAEGHIA QSG
|
|---|
| |