Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2726 |
Symbol | |
ID | 1041780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3111585 |
End bp | 3112277 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637146148 |
Product | hypothetical protein |
Protein accession | NP_744870 |
Protein GI | 26989445 |
COG category | [S] Function unknown |
COG ID | [COG2323] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTTCGT TTGATCTGCA ACGGATGCTG ATAGGCGACT TCCCTTTTAC CTTTCTGCTG GAAGTTGCTG TGCGTGTTTC AGCGGCCTTC CTGGCCGTGT TCTTCTTTCT GAAATTCAGT GGCCGGCGCG GGATCAGACA GCTGTCCCGG TTCGAGCTCG TGGTCATTCT CACCCTGGGC TCAGCTGCCG GCGATGTGAC CTTTTACGAG GACGTACCGC TGCTTCCGGT GGCCTTGGTT TTCCTCACGC TGTTCATGCT TTACCGAGGA ACGGTCTACC TCATGAGGCG AAACAGAACC TGCGAGGCCT GGATCGACGG GCTGCCGGTC ACGGTAGTGA AAGATGGCAT GTACGAAATC CATTCGCTGC GTCACATGAA CATTTCACCG AATGAGCTGT TCATGGAGCT ACGCCAGCAA GGTGTCGAGC ACCTGGGCCA GGTTCGACTG GGCCTTCTGG AAACCGATGG CGATCTCAGT TTGTATTTCT ACGATCAGCA AGACACACGC CCAGGCCTGT CAGTGCTGCC GGTCGAGCAT CGCCCGGAGT ACACATCGCC GCCCGGCGCC GGGGTGCATT GCTGCGTGAG CTGTGGTTTC CCGGCCTACC ATGAGCCTCA TGACACCCTG GCGTGTTCAC GTTGCGGTCA TACGGTCTGG TCGCCTGCAT TGGATACCGT GCGCAACCGT TAG
|
Protein sequence | MVSFDLQRML IGDFPFTFLL EVAVRVSAAF LAVFFFLKFS GRRGIRQLSR FELVVILTLG SAAGDVTFYE DVPLLPVALV FLTLFMLYRG TVYLMRRNRT CEAWIDGLPV TVVKDGMYEI HSLRHMNISP NELFMELRQQ GVEHLGQVRL GLLETDGDLS LYFYDQQDTR PGLSVLPVEH RPEYTSPPGA GVHCCVSCGF PAYHEPHDTL ACSRCGHTVW SPALDTVRNR
|
| |