Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2702 |
Symbol | |
ID | 1046219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3092952 |
End bp | 3094082 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146124 |
Product | hypothetical protein |
Protein accession | NP_744846 |
Protein GI | 26989421 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTC GCATTACGTC GTTGCTGTTG ATGATCCAAG GGGCTTGCCT TGCTGCGCAG GCACAGGCAG AGGGTTTTCC GACGCTCGCG CGGATTGCGC CGGGTTTTGG TTATTACGGG CTGGATTACG GCTTCGATGA CACGCTCAAG GTGTACGGCA CCGTGGATGC ATTCGCCAGC TATCACGACT CACAGCACCA CTCGGGTTTC AGGCTGGCCG GTGGCGGCGC CTGGACCAAC AAGCTCGGGC TGTACGCACG CAAGGCGCTT GACCCCGATA CCGTGGTGGA GCTTGACGTC GAGGAGGGTT TCAACCTCAA TGGCGAGGCC TTGGAGGGCA CCTGGGATAC CGTCGGCACC CTGCGCCTGG CGACAGTCGC CCTGCGCTCG CGCACCCTGG GCAAGCTCGA GTTCGGCAAG ACCTACGGCA TGGCCACACC CACATACGCC GACCCGTTCC TGGCCACCTA TGGCTCGCCC TACACCTACC TGGCCCTGCC TGCCGCCGGC AAGGGCGCCT TTTACCTTGA CCTGCGCCCC AAGCACACCC TGGCCTACAC CAGCCCGACC TTCAGTGGCT TCAGCCTCGG TACCGCGCTG AGCTTTGGCT TCGACGATGC CGCCAGCGCT GGGCGCACCG TGCGTGGCGG TGGCGCCCGG CTGCAGTACC GCAACAGCCG GGTGATGTTG CTGGCCTCCT ACAACCGTTA CTACAGCGAC CCATGGGACG ACGGCGGCGC TTCACGCCAG ACCGCCAACG ATTTCAAGAG CCTGTCGGCG TTCTACGATT TCGGCCCGCT GGCCACCAGC CTCACCTGGC AACGTCAGGA CGTGGACCAG GCCGGCACGC CCAGCACCAC GCTGTACACC TTCGGCATGA TGGCGCCGGT GGGCGAGCTG GACGTGCTGC GCCTGGCAGT GATGCAACGC CAGGTCAGCG CCCGCGACAA GGACGCGTGG GGAGTGATGA TCGGCTATGA CCACTTCATC AACCCCCGCT GGGCCCTTTA TGGACGCCTT GGCATGATCG CCAACCAGCG CGCCTCGTCG GTCACCTACG CCGGCACCCC GGTGGATCAG GCGGGCGATA ACCCAAGCAA CGTCTCACTA GGCATGTACT ACCACTTCTG A
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Protein sequence | MNTRITSLLL MIQGACLAAQ AQAEGFPTLA RIAPGFGYYG LDYGFDDTLK VYGTVDAFAS YHDSQHHSGF RLAGGGAWTN KLGLYARKAL DPDTVVELDV EEGFNLNGEA LEGTWDTVGT LRLATVALRS RTLGKLEFGK TYGMATPTYA DPFLATYGSP YTYLALPAAG KGAFYLDLRP KHTLAYTSPT FSGFSLGTAL SFGFDDAASA GRTVRGGGAR LQYRNSRVML LASYNRYYSD PWDDGGASRQ TANDFKSLSA FYDFGPLATS LTWQRQDVDQ AGTPSTTLYT FGMMAPVGEL DVLRLAVMQR QVSARDKDAW GVMIGYDHFI NPRWALYGRL GMIANQRASS VTYAGTPVDQ AGDNPSNVSL GMYYHF
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