Gene PP_2673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2673 
Symbol 
ID1046113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3060837 
End bp3061496 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content64% 
IMG OID637146095 
Productpentapeptide repeat-containing protein 
Protein accessionNP_744817 
Protein GI26989392 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.715814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTACC TGCCCTTGAC CTTGCTGCTG GCGCTATCCC CTGCCCTGGC AGTGAACGCC 
GACGACGCCG GCACCGATAC CCCCTTGACC ATCAACGGCT GCGTGATTGC CGAAGCCAGC
CAGTGCCCGG GGGCCAACCT GCGCGGCGCC AACCTGGCCA ACCAGGACCT GCGCAAGATG
AACCTGGCCG GTGCCGACCT GCGCGATGCC GACCTGCGTC ATGCCCAGCT GGACCTCGCA
AATCTGGAAA AAGCCCGCCT GCAAGGAGCC AACCTGACCC GCGCCAGCCT GCAACAGAGC
AATCTGCGCC TGGCTGACCT GAGCAACAGC AGGCTGGTGG CCATTCAAGG CTGGGGCTTG
TTCGCCCAGG GCGCACAGTT TGAAAAGGCG GACCTGCGCG CAGCCTATCT GCAGTTCGCC
AGGCTGTCCG GGGCAAAGCT GCAGCAGGCC AACTTGCAGG CGGCGGACCT GGAGATGGCC
TGGTTGAGCA AGGCTGACCT GCAAGAGGCC AACCTGGGGG ATGCCAACCT GCAGGAGGCC
AAGTTTGGCC AGAGCAACCT GGCACACGCC GATTTACGCG GGGCACGGCA GCATTACGGG
AATTTTCAGG AGGCCAACAT GGAGGGGTGC AAGGGGTGCC CTGAGACCTG GGACAAATGA
 
Protein sequence
MNYLPLTLLL ALSPALAVNA DDAGTDTPLT INGCVIAEAS QCPGANLRGA NLANQDLRKM 
NLAGADLRDA DLRHAQLDLA NLEKARLQGA NLTRASLQQS NLRLADLSNS RLVAIQGWGL
FAQGAQFEKA DLRAAYLQFA RLSGAKLQQA NLQAADLEMA WLSKADLQEA NLGDANLQEA
KFGQSNLAHA DLRGARQHYG NFQEANMEGC KGCPETWDK