Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2673 |
Symbol | |
ID | 1046113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3060837 |
End bp | 3061496 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146095 |
Product | pentapeptide repeat-containing protein |
Protein accession | NP_744817 |
Protein GI | 26989392 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.715814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTACC TGCCCTTGAC CTTGCTGCTG GCGCTATCCC CTGCCCTGGC AGTGAACGCC GACGACGCCG GCACCGATAC CCCCTTGACC ATCAACGGCT GCGTGATTGC CGAAGCCAGC CAGTGCCCGG GGGCCAACCT GCGCGGCGCC AACCTGGCCA ACCAGGACCT GCGCAAGATG AACCTGGCCG GTGCCGACCT GCGCGATGCC GACCTGCGTC ATGCCCAGCT GGACCTCGCA AATCTGGAAA AAGCCCGCCT GCAAGGAGCC AACCTGACCC GCGCCAGCCT GCAACAGAGC AATCTGCGCC TGGCTGACCT GAGCAACAGC AGGCTGGTGG CCATTCAAGG CTGGGGCTTG TTCGCCCAGG GCGCACAGTT TGAAAAGGCG GACCTGCGCG CAGCCTATCT GCAGTTCGCC AGGCTGTCCG GGGCAAAGCT GCAGCAGGCC AACTTGCAGG CGGCGGACCT GGAGATGGCC TGGTTGAGCA AGGCTGACCT GCAAGAGGCC AACCTGGGGG ATGCCAACCT GCAGGAGGCC AAGTTTGGCC AGAGCAACCT GGCACACGCC GATTTACGCG GGGCACGGCA GCATTACGGG AATTTTCAGG AGGCCAACAT GGAGGGGTGC AAGGGGTGCC CTGAGACCTG GGACAAATGA
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Protein sequence | MNYLPLTLLL ALSPALAVNA DDAGTDTPLT INGCVIAEAS QCPGANLRGA NLANQDLRKM NLAGADLRDA DLRHAQLDLA NLEKARLQGA NLTRASLQQS NLRLADLSNS RLVAIQGWGL FAQGAQFEKA DLRAAYLQFA RLSGAKLQQA NLQAADLEMA WLSKADLQEA NLGDANLQEA KFGQSNLAHA DLRGARQHYG NFQEANMEGC KGCPETWDK
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