Gene PP_2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2652 
Symbol 
ID1046046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3040395 
End bp3041180 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID637146074 
Producthydratase/decarboxylase 
Protein accessionNP_744796 
Protein GI26989371 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTT CGCTCTTCGT ACACCAACGC ACTGCAGCCT TGCTACTGCA ACACTGGCGC 
AGCGGTGACC TGCTGACAGA ACTGCCCGCC AGCCTCAAGC CCGAGACGTT GAAACAAGGC
TATGACAGCC AGGACCAGTT GTTTGCCGCT GCCGCAGGCC AGCGCGCCGG GTGGAAGCTG
GGCGTCGGCA GCCCGGCAGG CATGCGTGCC GGCAAGTTGT CGCGGCCCTT GATTGGCCAA
CTGGAAGCGG GGCGTTGCCA TGCCGATGGC GCACATATCC AGCTGCCAGC GGTTACGCCG
GTGACCATCG AATGCGAAAT TGCCTTCGTG CTGGACCGGG ATATTCCTCC GCAAGCCGGG
CGCGTACCGG TGAGTGAGGA TATTCGTGCC ACGTGCGTCA CCTTTGAAGT GGTGCGTTCG
CGCTTTGTCG ACCGCAAGGC TGTCGGCTGG CCAAGTTTTG TGGCTGACAA CGTCGGGTTT
GAAGCATTGG TGGTCGGCAA TAGCCTGGGC GCTGGTATAA ATGTGCCGTT GCTCGCCGAC
CTGGCCGAAA CCACCGAGGT GCATGTGGAT GGCCAACGGC GCGCCGGTGG CTTGTCTGGC
GATGCGGCCA CCGACCCGCT GGTGTCGCTG GCTCACCTGT ACGCACACGC TGCCGAGCGT
GGCCAGACCT TGAAGGCCGG GGATGTCGTG ACCACCGGGG CCATGTGCCA GCCGTTCGAT
TTGCATGAAA CAGGCCACCA GGTCAGCGCC AGGTTCCTTG GCCAGACCCT GACGTTTACG
CTGTAA
 
Protein sequence
MNRSLFVHQR TAALLLQHWR SGDLLTELPA SLKPETLKQG YDSQDQLFAA AAGQRAGWKL 
GVGSPAGMRA GKLSRPLIGQ LEAGRCHADG AHIQLPAVTP VTIECEIAFV LDRDIPPQAG
RVPVSEDIRA TCVTFEVVRS RFVDRKAVGW PSFVADNVGF EALVVGNSLG AGINVPLLAD
LAETTEVHVD GQRRAGGLSG DAATDPLVSL AHLYAHAAER GQTLKAGDVV TTGAMCQPFD
LHETGHQVSA RFLGQTLTFT L