Gene PP_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2601 
Symbol 
ID1045989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2974065 
End bp2974841 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID637146023 
ProductIclR family transcriptional regulator 
Protein accessionNP_744745 
Protein GI26989320 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.505615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0687199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTA GTCAGATCGA ACGCGCCTTC AGTCTTGTAG AAAGCCTTAC CGGTGAACCC 
CAAGGGCTGC CGTTACAAAC CCTGGCCGAG CGCCTGGACA TTCCCAAAAG CGCTGCCCAC
CGCATGCTCA CGGAGCTGGT GCGGCTGGGC TACGTGCGCC AGAACCGGGA AAACAGCCGC
TATCAGCTGT CGGCCAAGTT GGTAGCGCTG AGCTTTCGTT ACCTGGCCAG CAGCGGTGCC
GACATCATCC AGCCGATTCT TGACCGCCTG GCCCAGGACA GCGGTGAACT GGTGCGCCTT
GGGGTAATCG ACGGTGCCCG GCAAACCTGG ATCGCCAAGT CTCAGGGGGC CCGCTCCGGG
CTGCGCTACG ACCCGGATAT GGGGCGCGAC GCGCCGCTGT TCTATACCGC CTCCGGGCAC
GCCTGGCTGG CCAGCCTGGA CGATGAGCAG GCGCTGCAGA TGGTGTTGCG CCAAGGTATT
GCCGACCCCG ACCAGTTCGG CCCGAACGCG CCACGTTCCA CCGACGAGCT GCTCGCCTAC
CTGCACCGCG CCCGCGAGCG TGGTTATGCC TGGGTCGAGG AAACCTCCGC CATCGGCACC
TCAGCCCTGG CCGCAGTGGT GCGCCGCCCG CAAAGTGACG AGGTGATTGG CGTGCTGAGC
ATCGCCGGGC CCAGCGCGCG GCTGGCACAG AGCCGCCTCG CAGCGCTGGC ACCGCTATTG
TTGTCGGCGG CAGAAGAGCT GTCGGCGGCC AGTCCCGCCA GCGAGCTGTT TGCCTGA
 
Protein sequence
MAGSQIERAF SLVESLTGEP QGLPLQTLAE RLDIPKSAAH RMLTELVRLG YVRQNRENSR 
YQLSAKLVAL SFRYLASSGA DIIQPILDRL AQDSGELVRL GVIDGARQTW IAKSQGARSG
LRYDPDMGRD APLFYTASGH AWLASLDDEQ ALQMVLRQGI ADPDQFGPNA PRSTDELLAY
LHRARERGYA WVEETSAIGT SALAAVVRRP QSDEVIGVLS IAGPSARLAQ SRLAALAPLL
LSAAEELSAA SPASELFA