| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2566 |
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| Symbol | |
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| ID | 1045935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2929209 |
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| End bp | 2934281 |
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| Gene Length | 5073 bp |
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| Protein Length | 1690 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637145989 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | NP_744711 |
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| Protein GI | 26989286 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAATTCT CCTTGGCTGA AGCCTGCACC ATGACCTGCC TCACCCTCTC GCAGATGCTC
CCTCGCTGCC AGCCCCCCAC CGACCCGCGC ATACGCAGGA CCGACCGCGG CCAACAACTA
TCTACCGCAC CCCGGCGCCT TGATCAGCGT GGACTATCTC CCCCCACAAA AGAGATGGTG
ACCATGACAA CCCCGACACC GTTGCATCAA AACCAGATAA CACGCTCATT ACCGAAATGG
AGCAAGGCGC TCCATCCGAC GCATACGCGC AAGGTGGTGC AGAGCCTGTA CAAGGAATAT
CTCGATGAAG ATGGCAGCCC TTACGCGTGG TATGCCACTG CCGATGAGCC AACGCGTGAG
CAGTTGCACA ACGCATTGCA AACCCGTAAC AAACGGCTGG CGCAAGTCAA ACAGGCGCTA
GGCGAGTTCA AGGACATCAT CGCGTTCTGC GGCCCACTGT TGACCGAGCG GTTGAAGCTG
AATGTACCCG TAGACAGAGC GCAGTATGTC TTCCAGCCCT TTGAGTCAGA GGCCAACATC
TGGGTTGGCG TTCCCGATGT GGAAACGCCT TTGGTCCCGG ACGTGGAAGC GGATGTGCTG
GCCACCCGCC CCGTAGGCCA GCCGCAAACA CGCAGTTTGC TGGAGGCTGC CCTGCACAAC
TTCGAGGGGC TGGACGAAGT CGGTCCTTAC AGCAGGCTCA CCAACGCCGC TGGCAGCGAC
ACGCCCCTGG CAGGCCTGAC GATGGCGGAC TTCGTCAGGC ATTGTCGGGC GCTGGACCTT
GGCAAACGTT ATCAAGACCA TCTGCTTGCA ACCCATGAAG GCGCCAATCG CGCTGAAATC
CAGCGCCTGT CGATTGCAGC GAACCGTGAG GCCTTGAGGG TCCAGGCATT GATCGCCAGG
CTCAAAGGCC TGCTGAGCAA GGCCGGGCTC GATGCGCTTG CGCAGCTGTG CGACGGCAGC
CCTCACCCCA CCTATGACAA CGAGGCGTTG CATTGCTGGA ACTTCAACCT CTTCGATGTC
CCCGTCCACG AAGTACTGTT CATCGGGCCA GACAACCCTT ACCGCACTAA CCCCTGCATT
GTGTATGTCC CTGGCGACAG CGAGCACCCG GTAAGGGAGT TCGCTTCTCG TCAGGAAGCG
GGCAAGCACC TGCGCAGCCG GCTATTGCAA AGCGAGTTTC GCCGCGCCTT GGTGCATTTC
GCCTACAAGG ACAGGCAAAA AGAACTTGCC GTTAAGCTGG AAATTGCGCT GTTCGAAGAG
GATGAAGCGG GCATACGCAA ACCCCGAATC ATGCCAGTGA TCCCTTTCAC GCTCTCGCCA
ATCCGAACCG ACCCTTGGAC GAACCTATAC AACGCACACC TTGCGCGCAT GAAGGCCGAC
GCAAAAACCA TTGCAGTCCC TACCGCCGAA GTCGACGCCA ACGCCCGCAA TGAGCGTCTG
AAGTACTGGT TCGACCTGGG GATGAACGTG CTGAATGTCG CCGCGTTCTT CGTGCCGGGG
TTGAACACGG TCATGCTAGG CGTTTTTGCT TACGACCTGA TGAGCTCTGT TTTTACCGGG
TTCGAGGCCT GGGAAGAAGG TGATACCCGG CAGGCACTGG CGCAGCTGGA ATCATTGGCC
ATCAACGCGG GCGTGATTGC CGGCTTTGCA GTGGGCACCA GGATCGTCCA GGCGTCTGGC
TTTGTTGATG CACTGAAAAG TGTATGGCAT GAAGACAAGG AGGTGCTCTG GCACCCCGAC
ATGAAACCCT ATGCGAGCAC GGCGGCTATT CCTGAGGGGG CTCAACCCGA TTTGCTCGGC
CATGTGCACG TCGATGGAAA GACCTACCTG AAGCTGGATG GGACCCTGTA CGAGGTGTTT
CAGGGCGCTG ATCAGCAATG GCGCGTGCGC CACCCTGATG ACGCTCAGGC CTATGCCCCA
CGCTTGCTGC ATCATGGTAA CGCCCGCTGG CAACTGGCCC ATGAACAGCC TCTGGAATGG
GAACGTGAAC AGCTTGCGCG CCGCCTCGGC AGCCATAGCG CAGGCCTGGA CGACAGCGAA
CTGGACCATG CCATGCGCAC TACCGGTACC GATCCAGACG TGCTGCGCCG TGCCCAGGCA
GCGGGCCTGC CTCCACCCGC TTTGTTGATC GACACGCTGC AGCGGTTGCA ACTGGACAAT
CAGACACAAC AGATCATCAA CTGCGTACGC CATGGGTTGC CGCTGGCTGC GTACAAGAAC
TTTGCCTTGC CTGAGTTGCT GCGCCTGCCG GGGTGGCCCG AGGGGAACGT GCTGAAGGTT
TACCAAGGGC CAGAACCCTG GGGCGAATCG GTGCGCTACG GCCCCCCTCA CACGCTGGGC
CAGACAGAAA TCGAAATTAC CCGTACCGAC CTGGACAATG GCCAGTTGAG CCAAACCGTG
CTGGATCAGA TGGATGAAGA AGCCATTGAG CAGTTGCTCG GTGACACACC AACCGAGCAC
CGAGCGTCCG CACTGAACAA CAAACTCGCG CAACACCTGG AACAGCATCG CGAGGCGCTG
TTCGAGAGCC TGCAACAAAG ACGCCGTCCC ACACACCCAC CCACTGCACA AACCCTCGCC
CGGCAGTTTC CCGGGCTGCC GGACAGCGCG CTTGAAGAGT TGCTTGCCAA CATCAGCAAC
GCCGAACGGG AACGTCTGAC AAACGGACGA GTGCCGCTTC GCATTGCCGA GGAAGCACGC
CTTCTGCAAG CTCGAGCGCG GCTTGATCGT GCCCTCCTCG GCCTGTTCAG GCCCAGCCTG
GCCAACGACG ACAGTCTACG CATCAAGCAG GCGCTGCAAG CCGCGCACCC GCAGGCTGAA
CCGGCCCGGT TGCTGCAACT CGCCCTAGGT GATCGCCAGC ACTGCGCCTC ACTGCTTGGC
CAACAGCCCA TCAACCCCAG GTTCCGCTCC CCTTTGCGAT TGGCCAACGG CCGGCTGGGC
TATCCCCTGA GCGGCCGAGG CCTGCAAGGA CGCGCCTTGC CGGCTGCACG TCGACTCCGG
GCGCTCTACC CCGAACTCAG CAGCGAGCAA ATCACCGGGC TACAAGCCGA ACTGGCTCGA
GGAGGCGACC TGGGTAGCGC GATCAACCAG CTGGAGGTCG AGCAGCGTAC TCTCAACCGA
GATCTCAACC GTTGGGTAAG CACCGCCCGC ACCCTTGAAG AGCGCTTTGA TCGCCAGCAA
TGCACCGAGC GACTGATGAG CGCTTCCCGC CGTGAAGGTG GCGCGCAAGC CGAAACACTG
GTACTGGACC GTATGCAGCT CGAAGCGCTA CCCGCTTTCA CTGCACGCAT GCCGCATATT
CGCAATCTCA GGCTCGAGGG GCTGCAGATG CGGCGCCTGG AGGGCAGCTT CCTGACGAAC
TTCCCTAACC TGGAAACCCT GGAAATCGTC GGCAACCCGG ACATCGATGC AGAAACATTG
TTCGAGGCGC TGAGGTCGGC ACCGCGGCTA CGCGAGCTGG GCCTGACAGA CAATGGCCTG
ACCACCCTTT CACCCACCGC CCAACAGGCC ATCGGGGCAA TGCCCGGCTT GCGACTCCTG
TGGCTCAGTC GCAACCGGCT GCAACTCGAC ACCACCAGTT TGGGCTTCCT GACGCGCCTG
CCCCTGGATG CCCTCGGCCT GGCCCATAAT CAAATCACCC TCGACGAAAG CCTTGCCGCC
CAGTTTCAGG ACATGATCCA CCCCGTACTA CTGCACTTGT CAGGCAACCC ACTGCAACTG
GCACCCGACC TGCGCTTCAT GGCCCGTCTT GTCCACCTGG AGCTTGAGCG TTGCGAACTG
CAGCAGTGGC CCGACAGCCT GACCGTCCTG ATGAGCCAGC CCCAGTACCA ACTGCGCTAT
CTGAACCTTT CGTCCAACCG CATTCGTACC CTGCCAGACT TGCCTGGTGT GCTGCGTACC
CCGTTTGCCC GCGATGTCGC CGCGCACTTG CCGGAGCGCC GTTGGCTGTT CAACTACAAC
ACCCTGGAAG CCCAGACACG TGCACGCCTG GGCAGCAGCG GCGTCAACGT CTTCGAACAC
GCAGAAGACG TGCCACTGTG GCAAGGCGTT TTCCGTGGCG AGGCGAGCAA TGCCGAGGAG
CAGCTGTGGA GCGATCTGTT CGACCAAGGT GAAAACGCAG CGCTGCTGGG CGTACTCGAA
CGTCTTGCCC AGTCGGCAGA AGCGCAGCGT GATGGCGAGG CCCTGAGGAC GCGCGTCTGG
AAGCTGCTGG ATGACGCTGC CCACGACACC GTGCTGCGTG AGCGCCTCGC CACCGTGGCC
GGCGACTTCC CGCCAACCTG TGGCGACGCG GGTGCCGACG CGTTCAGTGC CTTGGAGATA
GAAGTGCTGG CCCACGAAGC TGCAGCCGTC GCCGGCAGTC GGCCGGCTGA TCTACTGAGC
CTGTATGGCA AGTTGTATCG ACGCAGTCAG GTCAATCAAC TGGCCGATCG CATCAGCTGG
AGAAGGTCCT TGCGCAAACA GGCGCTGCTC GACGGGGCCT TCGATGAAAA CCTCCCCCCC
TACGATGAGC TCGACGACCC CTCAGCCTTT CCGGACAGCG AACTTCAAAC GGGGCTGGTG
GACGATGTGG AGGTACGTTT GGCCTTGCGC CAGTCGTTGG CCAGCGCGCT GGACTACCCC
GAGCCGAGCC GAGGCATGCT GTACCGCAAT ACGGCCAGAA TCAACGACAC AATCATCGAA
ATGGTGAAAG CTGCGGTCCT TTCCCTGGAC AGGGATGCCA TCGCTCGGGA GCAATGGTTG
ACCCAGCAGC CGGGCTGGGT CGAGTACTTG AAACGAGAGC ATGCGGCCCA GTTCAGCCTG
ATCACCGACT TTTGGCGGCC AGGCCTTGAT TACCTCTATT ACTGCCTAGA TGAAACCGCC
GAGCCGGTGA CATCCCTGGA CAGCTCGGTG CGACGAGCCT TGGCCAGGGT CATGCCTGAA
AGCCCGGTGG ATGCTGACGG CAGGCTACGT CGCGTAGTGC TCAACGAGCA GCAGTATCGC
CAGGGCGTTG ACGCGCTGAC TGCCGAGCAG CAGCAGGTTG AAACCGGTCT GCTGATCAGC
CTCACCCGCC AGACGCAAAC AATCGGCCGC TGA
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| Protein sequence | MQFSLAEACT MTCLTLSQML PRCQPPTDPR IRRTDRGQQL STAPRRLDQR GLSPPTKEMV
TMTTPTPLHQ NQITRSLPKW SKALHPTHTR KVVQSLYKEY LDEDGSPYAW YATADEPTRE
QLHNALQTRN KRLAQVKQAL GEFKDIIAFC GPLLTERLKL NVPVDRAQYV FQPFESEANI
WVGVPDVETP LVPDVEADVL ATRPVGQPQT RSLLEAALHN FEGLDEVGPY SRLTNAAGSD
TPLAGLTMAD FVRHCRALDL GKRYQDHLLA THEGANRAEI QRLSIAANRE ALRVQALIAR
LKGLLSKAGL DALAQLCDGS PHPTYDNEAL HCWNFNLFDV PVHEVLFIGP DNPYRTNPCI
VYVPGDSEHP VREFASRQEA GKHLRSRLLQ SEFRRALVHF AYKDRQKELA VKLEIALFEE
DEAGIRKPRI MPVIPFTLSP IRTDPWTNLY NAHLARMKAD AKTIAVPTAE VDANARNERL
KYWFDLGMNV LNVAAFFVPG LNTVMLGVFA YDLMSSVFTG FEAWEEGDTR QALAQLESLA
INAGVIAGFA VGTRIVQASG FVDALKSVWH EDKEVLWHPD MKPYASTAAI PEGAQPDLLG
HVHVDGKTYL KLDGTLYEVF QGADQQWRVR HPDDAQAYAP RLLHHGNARW QLAHEQPLEW
EREQLARRLG SHSAGLDDSE LDHAMRTTGT DPDVLRRAQA AGLPPPALLI DTLQRLQLDN
QTQQIINCVR HGLPLAAYKN FALPELLRLP GWPEGNVLKV YQGPEPWGES VRYGPPHTLG
QTEIEITRTD LDNGQLSQTV LDQMDEEAIE QLLGDTPTEH RASALNNKLA QHLEQHREAL
FESLQQRRRP THPPTAQTLA RQFPGLPDSA LEELLANISN AERERLTNGR VPLRIAEEAR
LLQARARLDR ALLGLFRPSL ANDDSLRIKQ ALQAAHPQAE PARLLQLALG DRQHCASLLG
QQPINPRFRS PLRLANGRLG YPLSGRGLQG RALPAARRLR ALYPELSSEQ ITGLQAELAR
GGDLGSAINQ LEVEQRTLNR DLNRWVSTAR TLEERFDRQQ CTERLMSASR REGGAQAETL
VLDRMQLEAL PAFTARMPHI RNLRLEGLQM RRLEGSFLTN FPNLETLEIV GNPDIDAETL
FEALRSAPRL RELGLTDNGL TTLSPTAQQA IGAMPGLRLL WLSRNRLQLD TTSLGFLTRL
PLDALGLAHN QITLDESLAA QFQDMIHPVL LHLSGNPLQL APDLRFMARL VHLELERCEL
QQWPDSLTVL MSQPQYQLRY LNLSSNRIRT LPDLPGVLRT PFARDVAAHL PERRWLFNYN
TLEAQTRARL GSSGVNVFEH AEDVPLWQGV FRGEASNAEE QLWSDLFDQG ENAALLGVLE
RLAQSAEAQR DGEALRTRVW KLLDDAAHDT VLRERLATVA GDFPPTCGDA GADAFSALEI
EVLAHEAAAV AGSRPADLLS LYGKLYRRSQ VNQLADRISW RRSLRKQALL DGAFDENLPP
YDELDDPSAF PDSELQTGLV DDVEVRLALR QSLASALDYP EPSRGMLYRN TARINDTIIE
MVKAAVLSLD RDAIAREQWL TQQPGWVEYL KREHAAQFSL ITDFWRPGLD YLYYCLDETA
EPVTSLDSSV RRALARVMPE SPVDADGRLR RVVLNEQQYR QGVDALTAEQ QQVETGLLIS
LTRQTQTIGR
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