Gene PP_2525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2525 
Symbol 
ID1045785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2871908 
End bp2873071 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content63% 
IMG OID637145948 
Producthypothetical protein 
Protein accessionNP_744670 
Protein GI26989245 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.125523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.711801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACTA CCCTTGCCAT CGGCAACTAC CGCTCGATCA ACCACCTGGT GCTGCCGCTG 
AGCCAACTCA ACCTGGTGAC CGGTGCCAAC GGCAGCGGCA AATCCAACCT GTACAAGGCG
CTGCGCCTGC TGGCCGAAAC CGCACAGGGC GGTGTGGTCG AAGCCCTCGC CCGTGAAGGC
GGGCTGGATT CGACCTGGTG GGCTGGCCCA GAAACCAGCG CACGAATGCG GCGCGGCGAA
GTGCCCATCC AAGGCCAGCA TCCGAGCGAA GTCAGGCGCC TGCGCCTGGG CTTTGCCACC
GAAGACCTCG GTTTTGCCAT CACCCTCGGC CTGCCAATTC CCCTGCCGTA TCCGAGCGCG
TTCATGCTCG ACCCTGAAAT AAAGTGCGAG GCCATCTGGG GCGCTGGCGC CTATCGCCCC
TCTTCCTTGC TGGTCGAGCG CAAGAATGCC CTGGTGCGGG CCCGCGAGGG CAACCGCTGG
GCAGTGCTCG ATCAGCATGC TGACAGCGGC GAGAGCTTTT TCAACATCGT CGGCCGGCCA
CGCCAGGCAC CGGAGATCGG TGACCTGCGC GCGTTCATCA ACAGCTGGCG GTTTTACGAT
CACTTCCGGA TTGACCGTGA CGCGCCTTGC CGTCAACCCC AACTGGGCAC TCGCTCGCCG
GTGCTGCATC ACGACGGGCG CAACCTGGCC TCGGCGTTGC AGACCATTAT CGAAATTGGC
GATGTGGAGG ATCTGGAGGA AGCGCTGAAT GACGCGTTTC CCGGCAGCCG TCTGGAGATC
AATGCGCCAC CTGGCGGGCT GTTCAGTGTA CGGCTGCACC AGCACGGTCT TTTGCGCCCG
CTCGAGGGTG CTGAATTGTC GGACGGCACC CTGCGTTATC TTCTGCTGAT GGCCGCCCTG
CTCACACCAC GGCCGCCATC GCTGATGGTG TTGAACGAAC CGGAAACCAG TCTGCACGCG
GACCTGCTCC CGGCCTTGGC GCGGCTGATC ATTCGTGCAT CACGCCGTAG CCAGGTTTGG
GTGGTATCGC ACAGTGCGCC ATTAATCAAC GCGCTGGCAG CCTGTGACGG GTGCAATGTG
CTAGAGCTGG AAAAAATACA AGGGCAAACC CAGCTGCGGG GGGTTGGGTT GCTGGATGAG
CCGCTGTGGC GTTGGGCTGA CTGA
 
Protein sequence
MLTTLAIGNY RSINHLVLPL SQLNLVTGAN GSGKSNLYKA LRLLAETAQG GVVEALAREG 
GLDSTWWAGP ETSARMRRGE VPIQGQHPSE VRRLRLGFAT EDLGFAITLG LPIPLPYPSA
FMLDPEIKCE AIWGAGAYRP SSLLVERKNA LVRAREGNRW AVLDQHADSG ESFFNIVGRP
RQAPEIGDLR AFINSWRFYD HFRIDRDAPC RQPQLGTRSP VLHHDGRNLA SALQTIIEIG
DVEDLEEALN DAFPGSRLEI NAPPGGLFSV RLHQHGLLRP LEGAELSDGT LRYLLLMAAL
LTPRPPSLMV LNEPETSLHA DLLPALARLI IRASRRSQVW VVSHSAPLIN ALAACDGCNV
LELEKIQGQT QLRGVGLLDE PLWRWAD