| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2454 |
|---|
| Symbol | rbsB |
|---|
| ID | 1045623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2800655 |
|---|
| End bp | 2801614 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637145879 |
|---|
| Product | monosaccharide-transporting ATPase |
|---|
| Protein accession | NP_744602 |
|---|
| Protein GI | 26989177 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGC CGTTCCCCGG TCGTCTGCTG GCCCTCGCTG TCATTTCCTC GCTTAGCCTC
GCCTTGCCAT TGTCTGCCGC CCACGCTGAA GACAAGCCCA AGGTCGCCCT TGTCATGAAG
TCGCTGGCCA ACGAGTTCTT CCGCACCATG GAAGACGGCG CCAAGGACTA CCAGAAAACC
CATGCCGACG AGTTCGAGCT GATCGCCAAC GGCATCAAGA ACGAGACCGA CACTGGCGAG
CAGATCCGCA TCGTCGAGCA GATGGTCAAT GCCGGCGCCA AAGCGCTGGT GATTGCCCCG
GCTGATTCCA AGGCGCTTGT GTCGGCGGTG AAGAAGGCCA TGGACCAGGG CGTGGTGGTG
ATCAACATCG ACAACCGTCT GGACCCTGAT CTGCTAAAGA GCAAAGGCAT CAGCGTTCCC
TTCGTCGGCC CCGACAACCG CAAGGGCGCG CGCCTGGTTG GCGATTACCT GGCCAGCCAG
AAGCTCAAGG CCGGCGACCA GGTGGGCATT ATCGAAGGCG TGTCGACCAC CACCAATGCC
CAGCAGCGCA CCGCCGGCTT CAAGGACGCC ATGGACGCCG CGCAGATGAA AATCGTCTCG
GTACAAAGCG GCAATTGGGA GATCGACAAA GGCAACGCCG TCGCCGCCTC CATGCTCAAC
GAATACCCCG ACCTGAAGGC CTTGCTGGCC GGCAACGACA GCATGGCCCT GGGCGCTGTG
TCCGCCGTGC GTGCCGCTGG CAAGACCGGC CAGGTGCAAG TGGTGGGCTA TGACAACATC
AATGCCATCA AGCCAATGCT TGAAGACGGT CGGGTGCTTG CCACCCTCGA CCAGGCGGCC
AGCCAGCAGG CGGTGTATGG CATTCAGGCG GCGCTGAAAA TGGTCAAGGG CGAAAAGCCT
GATGTGGATG CCGACAACGT CATCCAGACC CCGGTCGAAC TCATCACCAA GAAGCCCTGA
|
|---|
| Protein sequence | MKLPFPGRLL ALAVISSLSL ALPLSAAHAE DKPKVALVMK SLANEFFRTM EDGAKDYQKT
HADEFELIAN GIKNETDTGE QIRIVEQMVN AGAKALVIAP ADSKALVSAV KKAMDQGVVV
INIDNRLDPD LLKSKGISVP FVGPDNRKGA RLVGDYLASQ KLKAGDQVGI IEGVSTTTNA
QQRTAGFKDA MDAAQMKIVS VQSGNWEIDK GNAVAASMLN EYPDLKALLA GNDSMALGAV
SAVRAAGKTG QVQVVGYDNI NAIKPMLEDG RVLATLDQAA SQQAVYGIQA ALKMVKGEKP
DVDADNVIQT PVELITKKP
|
|---|
| |