Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2429 |
Symbol | |
ID | 1045556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2776917 |
End bp | 2777501 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637145852 |
Product | lysine exporter protein LysE/YggA |
Protein accession | NP_744577 |
Protein GI | 26989152 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.716497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACAGT CGTTGTTGCC CTTCATTCTG TTTGCCCTGG TGTCCAGCAT CAGCCCGGGG CCGACCAACC TGTTGATCCT GGCCCATGGC GCCCGCCGGG GCCTGCGCGC AAGCCTGGCG CCGATCGTGG CGGCGTGTGG CGCGGCTGCA GCCATTGTGC TGCTCGTCGG GCTGGGGCTA GGCGAACTGC TGCTGCGCTA CCCCCTGGCG CAACAGCTGA TGAGCTGGGC CGGGGTGCTG TGGCTGAGCA GCCTGGCGTG GAAGATGCTG CGCAGTGCCG CCGCCCCGCT CCATGCGGCC ACGGCACAAG GCTTCAGTGC GCTCAGTGCG GCCTCGTTGC AGGTGGTGAA CCCCAAGGTC TGGTTGATGG CCGTGGCGGT GGTCGGGGTA TTTGCCGCGC CGTCGTTGCC AGTGTGGCAG CTGGCGCTGG TGTTCTTGCT GATCGCTCTG CCGAGCATGG CCGCCTGGGC GGTGTTGGGG GTGGGGAGCG CCCGGTGGCT GCAGGCACCG GGGCGGTTGC GGGTGTTCAA CCAAGTGTTG GCGGGGGTTT TGTTGATATC GGCATGGGCT GCAGTATTGG CCTGA
|
Protein sequence | MSQSLLPFIL FALVSSISPG PTNLLILAHG ARRGLRASLA PIVAACGAAA AIVLLVGLGL GELLLRYPLA QQLMSWAGVL WLSSLAWKML RSAAAPLHAA TAQGFSALSA ASLQVVNPKV WLMAVAVVGV FAAPSLPVWQ LALVFLLIAL PSMAAWAVLG VGSARWLQAP GRLRVFNQVL AGVLLISAWA AVLA
|
| |