| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2417 |
|---|
| Symbol | |
|---|
| ID | 1045544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2762888 |
|---|
| End bp | 2763907 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637145840 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | NP_744565 |
|---|
| Protein GI | 26989140 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.972091 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGATCC GCCTGTTACC CTGCATCGCG GTTGCCCTGG CCGCTCTGTT GGCCGCCCTG
CTGGCCGGTA CCGCCATTGG CGAAACCAAC CTGTCGCCCA GCGTGGTCGG TCAGGTGCTG
GCCAACCACC TGTGGCAAGC CGCCTACCCG GTGGACCCGA TCGACGCCGG CATCGTCTGG
AACTACCGCC TGACCCGCAC CCTGGTCGCG GCCGCTTGTG GCGCCGGGCT GGCCACCTGT
GGTGTCATCC TGCAGGCGAT GTTGCGCAAC CCACTGGCCG AGCCCTACCT GCTGGGGCTG
TCTGCCGGTG CCTCGACCGG CGCGGTACTG GTCGGCCTGC TGGGGCTGGG TAGCCTGGCA
TTAAGCATGT CTGCTGGGGC CTTCATCGGC GCCGGGGCCG CATTTGCCCT GGTGCTGGTG
CTGGCCCGCG CGGCCGGCCC CAGCAGCAAC AATGCACAGG TCATCCTTGC CGGTATCGCC
GGCTCGCAGC TGTTCAATGC ACTGACCGCC TTCCTGATCA CCAAGTCGGC CACCGCCGAA
CAGGCGCGCG GCATCCTGTT CTGGCTGCTG GGCAACCTGA GCGGCGTGCG CTGGCCTTCG
GTGTGGCTGG CCGTACCGGT GGCGGTTTTC GGCTTGCTGG TGTGCCTGTG GCATCGCCGT
GCGCTGGATG CCTTCACCTT CGGTGCCGAC TCGGCCGCCT CGCTGGGCAT CCCGGTGCGG
CGCACCCAGT TGCTGCTGAT CAGTTGTGCA GCGCTGGTGA CGGCGGTGAT GGTGTCCATT
GTCGGCGCCA TCGGTTTTGT CGGGCTGGTT ATCCCCCATG CCTTGCGCCT TCTGCTCGGC
CCCGGGCACA GCCGTCTGTT GCCCGCCAGC GCACTGGGCG GTGCGCTGTT CCTGATTGTG
GCAGACATTC TTTCGCGCAC GCTGATCACC GGCCAGGTGA TCCCGGTGGG CGTGGTTACG
GCGCTGATCG GTGCCCCCGT ATTCGCACTG ATTCTGGTCA GCCGTCGGGG GCGCCCATGA
|
|---|
| Protein sequence | MMIRLLPCIA VALAALLAAL LAGTAIGETN LSPSVVGQVL ANHLWQAAYP VDPIDAGIVW
NYRLTRTLVA AACGAGLATC GVILQAMLRN PLAEPYLLGL SAGASTGAVL VGLLGLGSLA
LSMSAGAFIG AGAAFALVLV LARAAGPSSN NAQVILAGIA GSQLFNALTA FLITKSATAE
QARGILFWLL GNLSGVRWPS VWLAVPVAVF GLLVCLWHRR ALDAFTFGAD SAASLGIPVR
RTQLLLISCA ALVTAVMVSI VGAIGFVGLV IPHALRLLLG PGHSRLLPAS ALGGALFLIV
ADILSRTLIT GQVIPVGVVT ALIGAPVFAL ILVSRRGRP
|
|---|
| |