Gene PP_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2397 
Symbol 
ID1045434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2742902 
End bp2743558 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content61% 
IMG OID637145820 
ProductEF hand domain-containing protein 
Protein accessionNP_744545 
Protein GI26989120 
COG category[S] Function unknown 
COG ID[COG3767] Uncharacterized low-complexity protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCAA GGCACCTTGG GGCCCGTTGC CGGGTGGTGT GTATCGCACT GTATCTGCCT 
GTGCTGCAGA CCTACTGCCA TACAAAAGCG CGCCTGGCAC GATACATCCC CGACAAACCG
CAACGGCCTA ATGGCTCCAC TTTCCAACCC CAGTGGAGCT GCATCATGAC TCAAGCAAAA
AACACCCTCG GCCTGCTCGG CGCCGCCCTG ATTGGCAGCA TGGCATTGAG CAACAGTGCG
TTCGCCGTCG AGCCGCTGGC TCAAGGTTAC CAACTGGCCT CGGCCAAAGT GGCCGGCGAG
GGCAAGTGTG GTGAGGGCAA GTGCGGGGGG AGCGGCAAGG CTTCCCAAAG CGAAGGCAAG
TGCGGTGAGG GTAAATGCGG CGCCGGCGCC AAGGCCGGGG CTGAGGGCAA GTGTGGTGAA
GGCAAGTGTG GTGACGCCTC GTTCGCCGAA ACCGACAGCA ATCACGATGG CAAGGTCTCG
CGCGATGAGT TTCTGGCGGT GGCCAAGGAC CGTGCCGGTG ATTTCGACAC GATCGATCGC
AACCATGACG GTTTCATCTC CGAGCAGGAA GCGGCCGATC ACCTCAAGGC GATTTACCAG
GCCAATGGCA AAGCCATGCC GGATGGCTTG TTCAGCCACC TGACCGGCAA ACCCTGA
 
Protein sequence
MAPRHLGARC RVVCIALYLP VLQTYCHTKA RLARYIPDKP QRPNGSTFQP QWSCIMTQAK 
NTLGLLGAAL IGSMALSNSA FAVEPLAQGY QLASAKVAGE GKCGEGKCGG SGKASQSEGK
CGEGKCGAGA KAGAEGKCGE GKCGDASFAE TDSNHDGKVS RDEFLAVAKD RAGDFDTIDR
NHDGFISEQE AADHLKAIYQ ANGKAMPDGL FSHLTGKP