Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2397 |
Symbol | |
ID | 1045434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2742902 |
End bp | 2743558 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637145820 |
Product | EF hand domain-containing protein |
Protein accession | NP_744545 |
Protein GI | 26989120 |
COG category | [S] Function unknown |
COG ID | [COG3767] Uncharacterized low-complexity protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCAA GGCACCTTGG GGCCCGTTGC CGGGTGGTGT GTATCGCACT GTATCTGCCT GTGCTGCAGA CCTACTGCCA TACAAAAGCG CGCCTGGCAC GATACATCCC CGACAAACCG CAACGGCCTA ATGGCTCCAC TTTCCAACCC CAGTGGAGCT GCATCATGAC TCAAGCAAAA AACACCCTCG GCCTGCTCGG CGCCGCCCTG ATTGGCAGCA TGGCATTGAG CAACAGTGCG TTCGCCGTCG AGCCGCTGGC TCAAGGTTAC CAACTGGCCT CGGCCAAAGT GGCCGGCGAG GGCAAGTGTG GTGAGGGCAA GTGCGGGGGG AGCGGCAAGG CTTCCCAAAG CGAAGGCAAG TGCGGTGAGG GTAAATGCGG CGCCGGCGCC AAGGCCGGGG CTGAGGGCAA GTGTGGTGAA GGCAAGTGTG GTGACGCCTC GTTCGCCGAA ACCGACAGCA ATCACGATGG CAAGGTCTCG CGCGATGAGT TTCTGGCGGT GGCCAAGGAC CGTGCCGGTG ATTTCGACAC GATCGATCGC AACCATGACG GTTTCATCTC CGAGCAGGAA GCGGCCGATC ACCTCAAGGC GATTTACCAG GCCAATGGCA AAGCCATGCC GGATGGCTTG TTCAGCCACC TGACCGGCAA ACCCTGA
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Protein sequence | MAPRHLGARC RVVCIALYLP VLQTYCHTKA RLARYIPDKP QRPNGSTFQP QWSCIMTQAK NTLGLLGAAL IGSMALSNSA FAVEPLAQGY QLASAKVAGE GKCGEGKCGG SGKASQSEGK CGEGKCGAGA KAGAEGKCGE GKCGDASFAE TDSNHDGKVS RDEFLAVAKD RAGDFDTIDR NHDGFISEQE AADHLKAIYQ ANGKAMPDGL FSHLTGKP
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