| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2392 |
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| Symbol | |
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| ID | 1045428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2729392 |
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| End bp | 2730594 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637145815 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_744540 |
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| Protein GI | 26989115 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.110299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTCGAC GTGGTTGCAG ACCATCGAGA TGGGGATGTC ATAGGCTTGC TCGGGATGCT
CCTGGCGCAG CGGCCAGGTT TCCAGCTTGC CGTTGCTGGG GAAGCGATAA TGCAGGCAGG
TATGCGCCGG CGGGTCTGCT CGACCAGATC GCCGATGGCA TGCACATCAG CCAGGCCATG
GCTGGGCAAT GGGTCACGGC GTATGCCTTG GGCTCGTTAC TGACCGCCAT CCCGTTGGTG
ACGTTGACCC AAGGCTGGTA TCGGCGCCGG GCGCTGTTGC TGGCGATCAT CGGCTTCGTG
CTGTTCAACG GGCTGACGGC CTTGTCGAAC TCCAACACGC TGACCCTGGT GCTGCGCTTT
TTCACGGGGG CTGCGGCCGG CCTGGCATGG GGCCTGATTG CTGGCCATGC CCGGCGCATG
GTGCCGGTGC CGTTGCAGGG CCGGGCCATG GCGCTGGCCA TGCTTGGGCA GCCGATTGCC
TTGTCGCTCG GCTTGCCGAT TGCGACATGG CTGGGAGCGG GGCTGGGCTG GCGCGCGACG
TTCGTGGTCG TCACGCTGGT GGCGTCGCAG CTGGTGGTGT GGGTGTTGCG ATCCGTGCCG
GACTACCCGG GGCAGGCTGC CGGCAAGCGC CCGGCGGCCA TGCAGGTATT GCGCACGCCA
GGGGTGTTGA TCGTATTGCT GGTGATCCTC ACCTGGATCC TTGGCCATAA CATTCTCTAC
ACCTATATCG TGCCGTTGCT GGCGGCGGCT GGCATGGCTG CGGACATTGG CCCGGTGCTG
ATGGTGTTTG GTCTGTCGGC GCTGGCCGGG ATCGGCCTGG TAGGGCTGCT GGTCGACCGG
CACCTGCGCA AGCTGGTGTT GCTGAGCCTG GCCGGTTTTG CCTTGGCCAC GCTGGCATTG
GGGCAGGCAT CGTCGTGGCT TGTGTACCTG AGCATCGCCT TGTGGGGAAT GACCTATGGC
GGCGCCCCGA CCCTGCTGCA GACAGCGTGC GCCGACGCCG CAGGCCAGGG TGGTGATGTG
GCGCAGTCGA TGCTGGTGAC GGTGTGGAAC TGCGCCATTG CTCTGGGCGG AATCATTGGC
GGATTGTTGC TGGCTGGGGC CGGCGTGGCG TGGTTTGGCG GGGTAGTGCT GGGGTTGATC
GCCTTGGCCT GGCTGCTGGC CGTGGCCGGG CGGGGAAGCG GTTTTGTGGC GGGGAGGCGC
TAA
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| Protein sequence | MFRRGCRPSR WGCHRLARDA PGAAARFPAC RCWGSDNAGR YAPAGLLDQI ADGMHISQAM
AGQWVTAYAL GSLLTAIPLV TLTQGWYRRR ALLLAIIGFV LFNGLTALSN SNTLTLVLRF
FTGAAAGLAW GLIAGHARRM VPVPLQGRAM ALAMLGQPIA LSLGLPIATW LGAGLGWRAT
FVVVTLVASQ LVVWVLRSVP DYPGQAAGKR PAAMQVLRTP GVLIVLLVIL TWILGHNILY
TYIVPLLAAA GMAADIGPVL MVFGLSALAG IGLVGLLVDR HLRKLVLLSL AGFALATLAL
GQASSWLVYL SIALWGMTYG GAPTLLQTAC ADAAGQGGDV AQSMLVTVWN CAIALGGIIG
GLLLAGAGVA WFGGVVLGLI ALAWLLAVAG RGSGFVAGRR
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