Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2379 |
Symbol | |
ID | 1045412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2719589 |
End bp | 2720260 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145803 |
Product | electron transport protein SCO1/SenC |
Protein accession | NP_744528 |
Protein GI | 26989103 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.229264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGGT TTTTCGACCG GCCCGTCCCG AGGGCCGGCA CCTTCCCTGT AAAGGATGGT TTCATGAATG ATCTTTTGAC CCGGCGTGCG GTTGTCGCCG GCATGGGCGT TCTCGGGCTT GGCCTGCTGG CAGGCTGCAG CCCGGCCCGG GGGCTCGAGT TCAAGTACGG CAAGAACATG AGCAACGAAA TCCTCGGGCG CAAGTTCAGC CTCAAAGACC CGCAAGGTAA CGTGCGCACC CTGTCGAGCT TTTACGGCAG CATGCCGATG GTCTTCTTCG GCTTCACCCA GTGCCCGGCC GTCTGCCCGA CCACGCTGGC GCGGGCGGCG CAGATTCGCA AGCTGCTGAG GGGCCGCGAC CGCGACCTGT TCCAGGTGGT GTTCATCACC CTGGACCCGG AGCGCGACAC GCCCGAGGTG CTCGATGCCT ACGTCAAGGC CTTCGACCCG ACGTTCACCG CGCTGACCGG CACCCCCGAG GAAATTGCCG CCGTGGCCAA GGAATTCAAG GTGTTTTACG AGAAGGTTCC GGCCGGAGAC ACCTACACCA TTTCTCACTC GTCCACTAGC TACGTCTACG ATACGCGTGG CACCCTGCGC CTGAGCCTGG GCCATTCCCT GAACGCCAAG GAATGCGCCG AAGATCTGGT CACCCTGATG GAGATCTGCT GA
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Protein sequence | MPRFFDRPVP RAGTFPVKDG FMNDLLTRRA VVAGMGVLGL GLLAGCSPAR GLEFKYGKNM SNEILGRKFS LKDPQGNVRT LSSFYGSMPM VFFGFTQCPA VCPTTLARAA QIRKLLRGRD RDLFQVVFIT LDPERDTPEV LDAYVKAFDP TFTALTGTPE EIAAVAKEFK VFYEKVPAGD TYTISHSSTS YVYDTRGTLR LSLGHSLNAK ECAEDLVTLM EIC
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