| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2369 |
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| Symbol | |
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| ID | 1045399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2702841 |
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| End bp | 2707028 |
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| Gene Length | 4188 bp |
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| Protein Length | 1395 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637145793 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | NP_744518 |
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| Protein GI | 26989093 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCTT CCGTAATACC TGCCGATTCC ATCGATGCGC TGATTGCCCG TCAGTTGCCA
GGCTGGCTCA AGCGCGCGTC TGCCCAAGAG CTGACAGAGC TGCGCGCCGC TGCTTTGCGC
CAACAGCGGG CGCAGGACCA AGTAGACGCC TGGTTAGGGG CCATAACCCC CTTGGATGAG
TTCGCCGAGT CGTTGCTCAA ACGTGCGCCC GAGGCCCGTT CGATCAAGCA GGTAGACCTG
CGCCAGGCTC AGCTCAGGTT GGTGACCCTC CAGCCAAAAC CGTCGATATC GCCTGCTTTA
CCTAGCACGT CAACACGCAT CGTCAGCACC CAGACGCTTC TCTCGGCGGC ACTGCATAAC
TTCCACGAAA AGGAAATGCA GCCTGGCTGG TTCGCGGCCG GGTCGCAGTT GGTCACTGCC
AGCGGGCACC TGCTGCCGCT AAGTGCGCAA GCCTTTGTCC GCCTTTGCAG AGACATTGAT
ATTGGCAGGC GTTATCAAAG CCATTTGCAA TCGAAGCTTG AAGGCGAGGG GGGGGCCGTC
GAGAGCACCC TGGAGGAGGC GTTGAGGGCC AACCTGGCGC TTGCTGCAAT CGCCGCAAGG
ATCAAGGATG AAATCGATGA GCAGACCTGT CAGTGGATCA ACCAGGCGGT GGGCACAGCG
TCTTTCCTGC CAGCCGACAA CGCCGTGTTG AAGTGTCACA CCCTGCGGCT GTTGGGGAAG
GAGGTCATTG GCGCACTGGT GATCGAAGTG CGTCAGAACG CCCGCCTGCT TGGCGTTATC
GCGTGGTTCC CTGAGGACCC GTATGCCCCG GTGAGTTGGC ACACCAGCTG GGAGCTGCTG
TACATGACGC TTGGCATACG CTTGCGTAAT GAGGCCTATC GGCGCTACTT CCAGCGCTTC
GTCGCAGAGC GTGATCGCAT CGCCTTCTGC GCGGCCCTGA ACGCACTGCT CAGCCACGGT
AATACTGTTC TTCCGCTTGA GCTGGATGGC CGCTGTTTTG CGATCGAGGG CGACGTGTTC
GTCGCGCTGC GCCAAGCCCG GATCGAAAAA ATGCTGGATG ACGCACGGGT ATTGGCGGTT
TCGACAGAGG ATGAAGATGT CGCCGACCGT CGCGCACGTT TGCAGGGCTA TCTGGATTTG
GGGTTGAGCG TGGCAGGCCT GGCAGCGCTG TTTGTGCCTG TGTTGGGGCA GGCCCTGCTG
GGGCTTACGG TGGTGCAACT GGCGGGTGAG GTGTACGAAG GCTACCAGGA TTGGCAGTTG
GGTGATCGCG ACGCCGCATT GGGCCACTTG TTCAACGTGG CCGACACGGT CGTGATGGCG
GCGGTGACGG CGGCCGGAGC GACGGCACTT GGCAAGCTGG CACAGCGAGT GGCGCGGGTG
GATGCCATGG TGCCAGTAAG CCTGGGCGAT GGCCAGTTGC GGCTGTGTGA TCCGTCCTTG
TCGGGCTATC AGCGTGAGGG CGTCGATCTG ATGGTAGGCC AGGCCGTGAA TGAAACTGGC
CGTTCGCTGA GGCGCCTGCA CGATGCTGTC TATGAGGTGA GCGAAGGGGA CGATGGCGCA
TGGCGTATTC ATCACCCATC AAGGCCAGGG GCGTATTCAC CAGCACTTGA GCACAATGGT
GCCGGGGGAT GGGTGCATGA GTTCGAGCAA CCGCAGCGCT GGCATGACCC CGCCTACATG
GTGCGCCGCC TTGCCAGCCG CACGGCGCAG GTGCCCGATG AGGCGGTATC TGTAGCGCTG
CAGACCACCG GTTTCGAGGC TGACTGCCTG CGCCGTTTGC TGCTGGAAAA TGCGCCCGCG
CCGGCACGCT TGCTCGATGC CATCGAACGC CAGCAATTGC ACCGTGATTT CCCGATGTTG
CGGGGGGACG CTTTCGAGGA GGTCTTCAAC GAGCGACAGA TCAGCCCGCA AGCAGCGGAC
CGCGTATTGA TGCGGGACTT CCCAGGCCTT TCCCACCGCT GCGCACGGGA AATCGTCGAG
GGGGCCAGCA GCATCGAGAT GGAGAGCCTG ACGGGTGCAG GCCGGGTACC CCTGGCCTTG
GCGGAGCGTG CCCGCTGGGC AATACGCGAC AGCCGGATAG ACCGTGCCTG CGCAGGGTTG
CGCCAGGCCG CCGCAGAAAA TGACGATACC GGTAAGCTCG CGCTGGGCCT GATCGATGCC
ATCGCCCCTT GGTCGGCTGG GGTCAACGTT GAGCTGCCTG CCGCGGGCAG GGGTGGGTTG
CTGCAGACGT TGAGACGGCA GCTGGACAGC CGCCAGCGAC AGTTGCTTGG TATTAGCCAG
ATGACGGATG ACGCACTGGG TGAGCGGCTT GGGCGTGAGG CACTCGCTGA CCGTGAAGCG
GCGGCCCGAA TGATTGGGCT GGCCCGTGTG GGGCAGGGGA TTCGCCCTCC TGTACGGTTG
TTCGATGGAC GGTTGGGCTA CCCGCTCAGT GGCCACCTGA CAGGGACTCG CCAGGCACTG
CGGCGCACGT TGAACCACGT GTATCCGGTG ATGAGCAGTG AGCAGCTGGA GGCCTATCTG
CAAGACCTGG CTTGGCGGGG AGTGGACCCC TGGAACCATG TGAGCCAACT GCTACAGGCC
AAGGTCAGCC TCAAGCAGGC ATTGCAAGCC TGGCGAAATG ACGCAGGACT GAACATTGTT
CGCCGCCTGC GTCGTTTCAA GGTTGCCAGG CGCATTACGG CAAGCTGGCA GCGCTTTACC
CCAGGGGAGG TGGCGGGTGA CTACCACCTG ACCCTCGTGG GTGAGCGGGT GGGTGAGTTG
CCGACCTTGC CTGACAATGT GAGTTTCGAC CACATCACGC ACCTGACCCT GCGCGATATG
CAGGTGACGA GCCTTGATGC AGGCTTTCTT GGTCGCTTCA GCAAGGTACG CAACCTGGAC
TTGCGGAACA ACCAGCTGAC GCGCCTTCCC GCAGGTATCG AGCAACTGAC CGAACTGAGG
ACCCTGCGCC TTGGCGGCAA CCAGATCGTG CTTTCCAGCG AGGATAACCT GCGTTTGAGC
CAGCTTGTGG AACTGCGCCG CCTGGAGCTC AACGGCAACC CGGTCGGTTT GCTGCCACCC
TTGGCGTCTT TCCCCCTGCT GCGCCGGCTG TCCTTGCGCA ACACCGGGCT GGGCGAACTG
CCCGCTGATC TGGCCAGGCA CGGTAATCTG GAGTTGCTGG ACATGCGTGA CAACCAGATC
CAGACGCTGC CTGAAGCGTT GTCTTTAGTG CCGCTTCGCC TGTGGCGGGG CCTGGAGCTG
CACGACAATC CACTCTCGGA CGAAACCCTG CAGCGCTTGC AGTTGGCCAG GGCGTCGGCC
GGGGCCGCTG AGCGGCGACG TGTAGCCCAT GCCACTGCGA TCCCGAATGC TGCAGCCCCT
TGGTTGTCAG GATTCACGCC GGCCCAGCGC GAGGTGCGAT TGGCGAGCTG GAACCGCTTG
AACCAGGAAG CCGGGGCGCA GGATCTGTTC CGCTTTTTCT CTGATTTACG CGCCCTGCGT
GAATACGACG CACAACCGCG CGACCTGCAG GCCCGGGTGT GGCATATCCT CGAGGCCTGC
GAGCAGCACG CTGAAGTACG CGCGAGCCTG TTCGAGCAAG TTGCCCGGCC GCGCAGTTGC
AGTGACGAGT TGCTGCTGAC GCTCAGCGAG CTGGAGGTTG GCGCGCTGGT CGCCAAGGCC
GGTACAGCCG GTACCGGGTT ACAGAAGGAG CGGGCGCTGG TCAGGCTGGG GCGTTCGTTG
TTCCGCCTGG ACAAAGTCAA CGCAATTGCC GCGCGGCATA TTGCGGATTA CTTCTCGAAC
GATCCCGTTG AGGTTTACCT GACCTATCGC GTCAGGCTGG CAGATAGTCT CGACCTTCCC
GTGCAGCCCA GCCATCTTTC GTACGAGAGT TTCAGTGGAG TTGGCCGTGA AGACCTGGAC
GCCGCGCGCA GCGAGGTGCT GCGGCAGGAA ACGCCACAAG CCTTGGCGCA GGCGCTGGCA
GATCGAACCT TCTGGCAGGA CTACCTGCAG GAGCAGCAGG CGGCGCGCTT CAGCCGCCTG
GACGAGCCTT TTCAGCAGCG CCTGGATGCG TTGCTCGAAC AATCGAAAAC GCTGAGTGAT
GGCGACTATT TTGCCCAGGT CGAGCATATC TGCGCAGCGC GTGAGGTCGC GAAACGGCAG
CTTTTGCTTG AGTTGAGCCG TGAGGCAATC CAGCGCCACG GCCTGTGA
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| Protein sequence | MTPSVIPADS IDALIARQLP GWLKRASAQE LTELRAAALR QQRAQDQVDA WLGAITPLDE
FAESLLKRAP EARSIKQVDL RQAQLRLVTL QPKPSISPAL PSTSTRIVST QTLLSAALHN
FHEKEMQPGW FAAGSQLVTA SGHLLPLSAQ AFVRLCRDID IGRRYQSHLQ SKLEGEGGAV
ESTLEEALRA NLALAAIAAR IKDEIDEQTC QWINQAVGTA SFLPADNAVL KCHTLRLLGK
EVIGALVIEV RQNARLLGVI AWFPEDPYAP VSWHTSWELL YMTLGIRLRN EAYRRYFQRF
VAERDRIAFC AALNALLSHG NTVLPLELDG RCFAIEGDVF VALRQARIEK MLDDARVLAV
STEDEDVADR RARLQGYLDL GLSVAGLAAL FVPVLGQALL GLTVVQLAGE VYEGYQDWQL
GDRDAALGHL FNVADTVVMA AVTAAGATAL GKLAQRVARV DAMVPVSLGD GQLRLCDPSL
SGYQREGVDL MVGQAVNETG RSLRRLHDAV YEVSEGDDGA WRIHHPSRPG AYSPALEHNG
AGGWVHEFEQ PQRWHDPAYM VRRLASRTAQ VPDEAVSVAL QTTGFEADCL RRLLLENAPA
PARLLDAIER QQLHRDFPML RGDAFEEVFN ERQISPQAAD RVLMRDFPGL SHRCAREIVE
GASSIEMESL TGAGRVPLAL AERARWAIRD SRIDRACAGL RQAAAENDDT GKLALGLIDA
IAPWSAGVNV ELPAAGRGGL LQTLRRQLDS RQRQLLGISQ MTDDALGERL GREALADREA
AARMIGLARV GQGIRPPVRL FDGRLGYPLS GHLTGTRQAL RRTLNHVYPV MSSEQLEAYL
QDLAWRGVDP WNHVSQLLQA KVSLKQALQA WRNDAGLNIV RRLRRFKVAR RITASWQRFT
PGEVAGDYHL TLVGERVGEL PTLPDNVSFD HITHLTLRDM QVTSLDAGFL GRFSKVRNLD
LRNNQLTRLP AGIEQLTELR TLRLGGNQIV LSSEDNLRLS QLVELRRLEL NGNPVGLLPP
LASFPLLRRL SLRNTGLGEL PADLARHGNL ELLDMRDNQI QTLPEALSLV PLRLWRGLEL
HDNPLSDETL QRLQLARASA GAAERRRVAH ATAIPNAAAP WLSGFTPAQR EVRLASWNRL
NQEAGAQDLF RFFSDLRALR EYDAQPRDLQ ARVWHILEAC EQHAEVRASL FEQVARPRSC
SDELLLTLSE LEVGALVAKA GTAGTGLQKE RALVRLGRSL FRLDKVNAIA ARHIADYFSN
DPVEVYLTYR VRLADSLDLP VQPSHLSYES FSGVGREDLD AARSEVLRQE TPQALAQALA
DRTFWQDYLQ EQQAARFSRL DEPFQQRLDA LLEQSKTLSD GDYFAQVEHI CAAREVAKRQ
LLLELSREAI QRHGL
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