| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2312 |
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| Symbol | |
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| ID | 1045301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2641735 |
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| End bp | 2643141 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637145735 |
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| Product | lytic transglycosylase family protein |
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| Protein accession | NP_744461 |
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| Protein GI | 26989036 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000348067 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCGAT GCTGGCTCAT TTTTCTGCTG ACGCTGGGGT TGGCCTTTGC CGGTCCCGCC
CAGGCGCGCT CGCCGGGGCC GCAGCAAAAC ATACCGCCTG CCAAGGTGCG TGACCTGGCG
CAGATTCGCA CCAGCAAAGT ACTGCGAGTG CTGGTCAACC AGAGCCGCAA CAGTTCTGGT
GAGGTGAAGG GTGAGCCAGT CGGCATCGAG TATTATCGCC TGCGTGCCCT GGAGCATTTC
CTCAATGCTC GTACCGCCGA CGACCAACAG ATCCAGCTAA AGCTCATCCC GCGGGCCAAG
GAACAGTTGC TGGGCGCCCT GGCCCGCGGC GAGGGTGACC TGGCCGCGCC GGGCGAGCTG
CTTGACCCCA CTACGGTGAG CGGTGTCCGC AGCAGTGCAC CGATACTCGA CCAGGTGCCG
CTGATGCTGG TCGGGCGCAA AGGCGAGCGA AGTTTCAGCA AGGTCGAACA GCTGTCAGGG
CGTACCGTGG CCCTGACCAG TGCCAGTGCC GCCGGGCCGC TGATCCAGCA GGTCAACCAG
CAACTGGCAC TGCGCAAGCG GCCGCCGATC AAAGTGGAGT GGGTCGATTC GACGCTGGCC
GTGGAGGATG TGCTGGAGAT GGTACAGGCA GGCATCTACC ACCTGACCGT GGTCGAGCAG
CCCATTGCCC GGCGTTGGGC CCGGGTTATG CCGCGCCTGC GCCTGGACAG CCGGGTGCGC
CTGGGGGCGC CGCAAGCCAT GCGCTGGTAT GTAGGGGGGG AAGCGCCGCA ATTGCTGGCC
GCAGTCGATC ACTTTCTGCA AGGTTACCGC GCGCCAGATA ACCAGGATGC GGCGTTCGAG
CGCATCTACC GCCGCCAGTA CCGGGTACAC AACCCGTTGG CCAGCAAGGA TCGCCAGCGT
CTGGCATCGG TGCGGGCGGT GTTGCAGAAG CATGGCCAGG CGCAACAGAT CGACTGGCTC
AACCTGGCTG CATTGGCCTT CAAGGAGTCG ACGCTCAACC CGGCTGCACG CGGTACTGGC
GGTGCCCATG GCCTGATGCA GATTACCCCT TCGGCGGCCC AGCGGGTGGG GGTGAGCAAT
ACTGCGACGG TAGATGGCAA TGTCCTGGCC AGTGCCCGTT ACCTGGCGCT TATCCGGCGC
AAGTTTTTTG CCAGTGCCAA GATCAACGAG CGTGAGCGCA TGGCCTTCGT GCTGGCAGCC
TACAACCTGG GCCCCGAGCG GGTTCAGGCC ATGCGTGCAG AGGCTCGACG GCGGGGGCTC
AACGGCAACC AGTGGTTTTT CCAGACCGAA CGCATCGCCA TGGAGCAAGT GGGGATGGGA
CCGGTCAACT TCGTCAACAG CATCAACAAG TACTACCTGG CGTTCAACCG CGAACGTGCG
GCACTGGAGC GTGTAGCGAA GCGTTAA
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| Protein sequence | MQRCWLIFLL TLGLAFAGPA QARSPGPQQN IPPAKVRDLA QIRTSKVLRV LVNQSRNSSG
EVKGEPVGIE YYRLRALEHF LNARTADDQQ IQLKLIPRAK EQLLGALARG EGDLAAPGEL
LDPTTVSGVR SSAPILDQVP LMLVGRKGER SFSKVEQLSG RTVALTSASA AGPLIQQVNQ
QLALRKRPPI KVEWVDSTLA VEDVLEMVQA GIYHLTVVEQ PIARRWARVM PRLRLDSRVR
LGAPQAMRWY VGGEAPQLLA AVDHFLQGYR APDNQDAAFE RIYRRQYRVH NPLASKDRQR
LASVRAVLQK HGQAQQIDWL NLAALAFKES TLNPAARGTG GAHGLMQITP SAAQRVGVSN
TATVDGNVLA SARYLALIRR KFFASAKINE RERMAFVLAA YNLGPERVQA MRAEARRRGL
NGNQWFFQTE RIAMEQVGMG PVNFVNSINK YYLAFNRERA ALERVAKR
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